RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 HOXD9P28356 352 aaPredicted RBP3.61□□□□□ -1.83
SRP54-209ENST00000555746 ELF1P32519 619 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 CYP2J2P51589 502 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 ZNF91Q05481 1191 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 GALNT2Q10471 571 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 DDX10Q13206 875 aaKnown RBP3.61□□□□□ -1.83
SRP54-209ENST00000555746 PKP1Q13835 747 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 RALBP1Q15311 655 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 GPR68Q15743 365 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 SLC18A3Q16572 532 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 NFIL3Q16649 462 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 ZNF766Q5HY98 468 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 C10orf25Q5T742 122 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 ASPHD1Q5U4P2 390 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 MORN5Q5VZ52 161 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 TTLL5Q6EMB2 1281 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 AAGABQ6PD74 315 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 FAM43BQ6ZT52 329 aaPredicted RBP3.61□□□□□ -1.83
SRP54-209ENST00000555746 KDELC2Q7Z4H8 507 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 ADGRG6Q86SQ4 1221 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 SLC44A5Q8NCS7 719 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 TNIP2Q8NFZ5 429 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 TBC1D22AQ8WUA7 517 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 FAR1Q8WVX9 515 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 RNF125Q96EQ8 232 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 RRP36Q96EU6 259 aaKnown RBP3.61□□□□□ -1.83
SRP54-209ENST00000555746 APOPT1Q96IL0 206 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 SLC26A6Q9BXS9 759 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 INTS2Q9H0H0 1204 aaKnown RBP3.61□□□□□ -1.83
SRP54-209ENST00000555746 HIPK3Q9H422 1215 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 EPHX3Q9H6B9 360 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 ACTR5Q9H9F9 607 aaPredicted RBP3.61□□□□□ -1.83
SRP54-209ENST00000555746 PREBQ9HCU5 417 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 ZNF304Q9HCX3 659 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 RNF146Q9NTX7 359 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 TMEM184CQ9NVA4 438 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 ZDHHC7Q9NXF8 308 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 TERF2IPQ9NYB0 399 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 GRHL1Q9NZI5 618 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 HCN3Q9P1Z3 774 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 UTS2RQ9UKP6 389 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 BTBD3Q9Y2F9 522 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 ZNF804BA4D1E1 1349 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 GCC2Q8IWJ2 1684 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 ZMYM2Q9UBW7 1377 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 COL18A1P39060 1754 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 AKAP12Q02952 1782 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 PCSK5Q92824 1860 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 KIF1AQ12756 1690 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 C17orf113A0A1B0GUU1 675 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.6□□□□□ -1.83
SRP54-209ENST00000555746 KCNU1A8MYU2 1149 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 F9P00740 461 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 SERPINC1P01008 464 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 CIITAP33076 1130 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 MAP2K2P36507 400 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 SKIV2L2P42285 1042 aaKnown RBP3.6□□□□□ -1.83
SRP54-209ENST00000555746 CCT4P50991 539 aaKnown RBP3.6□□□□□ -1.83
SRP54-209ENST00000555746 PMPCAQ10713 525 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 NAA25Q14CX7 972 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 PIK3CD-AS1Q5SR53 167 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 TMEM268Q5VZI3 342 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 TBC1D9BQ66K14 1250 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 ACAD10Q6JQN1 1059 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 INO80CQ6PI98 192 aaPredicted RBP3.6□□□□□ -1.83
SRP54-209ENST00000555746 C17orf99Q6UX52 265 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 ZNF793Q6ZN11 406 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 PIP4P1Q86T03 277 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 IGFN1Q86VF2 1251 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 MON1AQ86VX9 555 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 WDR5BQ86VZ2 330 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 CNGA4Q8IV77 575 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 FAM9BQ8IZU0 186 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 FAM185AQ8N0U4 392 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 RUFY2Q8WXA3 655 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 RFFLQ8WZ73 363 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 CNOT9Q92600 299 aaKnown RBP3.6□□□□□ -1.83
SRP54-209ENST00000555746 ZFYVE19Q96K21 471 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 EYA3Q99504 573 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 ANP32EQ9BTT0 268 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 IFT27Q9BW83 186 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 SEMA4BQ9NPR2 832 aaPredicted RBP3.6□□□□□ -1.83
SRP54-209ENST00000555746 NRIP3Q9NQ35 241 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 THSD1Q9NS62 852 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 ATP8A2Q9NTI2 1148 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 NAP1L2Q9ULW6 460 aaPredicted RBP3.6□□□□□ -1.83
SRP54-209ENST00000555746 ARHGAP26Q9UNA1 814 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 DHDHQ9UQ10 334 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 KIF13BQ9NQT8 1826 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 METP08581 1390 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 SSH2Q76I76 1423 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 TTC3P53804 2025 aa3.6□□□□□ -1.83
SRP54-209ENST00000555746 N4BP2Q86UW6 1770 aaPredicted RBP3.59□□□□□ -1.83
SRP54-209ENST00000555746 ZDBF2Q9HCK1 2354 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 ATRXP46100 2492 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 B4E171 279 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 ZNF814B7Z6K7 855 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 KIF1CO43896 1103 aaKnown RBP3.59□□□□□ -1.83
SRP54-209ENST00000555746 TMEM63AO94886 807 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms