RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 OMDQ99983 421 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 SEMA3CQ99985 751 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 COG4Q9H9E3 785 aa24.5■■□□□ 1.51
TMEM260-207ENST00000555497 LOC285095A0A1B0GVY8 99 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 MROH6A6NGR9 719 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 DIAPH2O60879 1101 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 COL6A2P12110 1019 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 POLD2P49005 469 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 ATN1P54259 1190 aaPredicted RBP24.49■■□□□ 1.51
TMEM260-207ENST00000555497 YBEYP58557 167 aaPredicted RBP24.49■■□□□ 1.51
TMEM260-207ENST00000555497 LRRC43Q8N309 656 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 RDH11Q8TC12 318 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 MCUR1Q96AQ8 359 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 NUDCD1Q96RS6 583 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 NDNQ99608 321 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 PDFQ9HBH1 243 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 MTRRQ9UBK8 725 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 RPL26L1Q9UNX3 145 aaKnown RBP24.49■■□□□ 1.51
TMEM260-207ENST00000555497 SEC24AO95486 1093 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 GRIA4P48058 902 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 KHDC1Q4VXA5 237 aaKnown RBP24.49■■□□□ 1.51
TMEM260-207ENST00000555497 LIPMQ5VYY2 423 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 TMPRSS6Q8IU80 811 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 PPP1R12CQ9BZL4 782 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 XPR1Q9UBH6 696 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 DNMT3LQ9UJW3 386 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 PLA2G4CQ9UP65 541 aa24.49■■□□□ 1.51
TMEM260-207ENST00000555497 F5H5T6 163 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 DLX3O60479 287 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 ACSL4O60488 711 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 CXCL10P02778 98 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 MPSTP25325 297 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 ATP5C1P36542 298 aaKnown RBP24.48■■□□□ 1.51
TMEM260-207ENST00000555497 TBCCQ15814 346 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 C5orf22Q49AR2 442 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 SLC9B1Q4ZJI4 515 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 EPGNQ6UW88 154 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 TDRD5Q8NAT2 981 aaKnown RBP24.48■■□□□ 1.51
TMEM260-207ENST00000555497 WDR60Q8WVS4 1066 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 TSNARE1Q96NA8 513 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 DEFB118Q96PH6 123 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 OLFM1Q99784 485 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 SEZ6LQ9BYH1 1024 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 MAN1C1Q9NR34 630 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 NOP53Q9NZM5 478 aaKnown RBP24.48■■□□□ 1.51
TMEM260-207ENST00000555497 SORCS3Q9UPU3 1222 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 SEC23IPQ9Y6Y8 1000 aaKnown RBP24.48■■□□□ 1.51
TMEM260-207ENST00000555497 MICAL3Q7RTP6 2002 aa24.48■■□□□ 1.51
TMEM260-207ENST00000555497 SPECC1L-ADORA2AF8WAN1 911 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 KLHL2O95198 593 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 CRABP2P29373 138 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 PGM1P36871 562 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 VEGFBP49765 207 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 KPNA1P52294 538 aaPredicted RBP24.47■■□□□ 1.51
TMEM260-207ENST00000555497 TMCO4Q5TGY1 634 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 PTAR1Q7Z6K3 402 aaPredicted RBP24.47■■□□□ 1.51
TMEM260-207ENST00000555497 LDB1Q86U70 411 aaPredicted RBP24.47■■□□□ 1.51
TMEM260-207ENST00000555497 LCA5Q86VQ0 697 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 OR7D4Q8NG98 312 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 HIPK3Q9H422 1215 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 MID2Q9UJV3 735 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 TRIM17Q9Y577 477 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 ZFP37Q9Y6Q3 630 aaPredicted RBP24.47■■□□□ 1.51
TMEM260-207ENST00000555497 TANC1Q9C0D5 1861 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 OR51F1A6NGY5 319 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 LDB2O43679 373 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 H2AFYO75367 372 aaKnown RBP24.47■■□□□ 1.51
TMEM260-207ENST00000555497 PAPSS2O95340 614 aaPredicted RBP24.47■■□□□ 1.51
TMEM260-207ENST00000555497 TPBGLP0DKB5 382 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 HOXD9P28356 352 aaPredicted RBP24.47■■□□□ 1.51
TMEM260-207ENST00000555497 NAGLUP54802 743 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 KPNB1Q14974 876 aaKnown RBP24.47■■□□□ 1.51
TMEM260-207ENST00000555497 KIAA0408Q6ZU52 694 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 HDAC10Q969S8 669 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 ZNF512Q96ME7 567 aaPredicted RBP24.47■■□□□ 1.51
TMEM260-207ENST00000555497 DRC3Q9H069 523 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 CWH43Q9H720 699 aa24.47■■□□□ 1.51
TMEM260-207ENST00000555497 ZNF840PA6NDX5 716 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 H3BNC9 293 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 HMGA1P17096 107 aaKnown RBP24.46■■□□□ 1.51
TMEM260-207ENST00000555497 DNAJB1P25685 340 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 LEPRP48357 1165 aaKnown RBP24.46■■□□□ 1.51
TMEM260-207ENST00000555497 ALDH7A1P49419 539 aaKnown RBP24.46■■□□□ 1.51
TMEM260-207ENST00000555497 RPS24P62847 133 aaKnown RBP24.46■■□□□ 1.51
TMEM260-207ENST00000555497 POU4F1Q01851 419 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 USP41Q3LFD5 358 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 ACBD5Q5T8D3 534 aaPredicted RBP24.46■■□□□ 1.51
TMEM260-207ENST00000555497 POU5F2Q8N7G0 328 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 HEXDCQ8WVB3 486 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 SREK1Q8WXA9 508 aaKnown RBP24.46■■□□□ 1.51
TMEM260-207ENST00000555497 NSMCE3Q96MG7 304 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 MMADHCQ9H3L0 296 aaPredicted RBP24.46■■□□□ 1.51
TMEM260-207ENST00000555497 FAM96AQ9H5X1 160 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 MARCH4Q9P2E8 410 aaPredicted RBP24.46■■□□□ 1.51
TMEM260-207ENST00000555497 H0Y3Z8 333 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 COCHO43405 550 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 KLKB1P03952 638 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 GNAZP19086 355 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 PTPRCAPQ14761 206 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 ARL13AQ5H913 290 aaPredicted RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms