RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CCDC15Q0P6D6 951 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 ANGPT1Q15389 498 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 WHAMMP3Q1A5X7 153 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 MAP7D1Q3KQU3 841 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 FAM182AQ5T1J6 154 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 BRAT1Q6PJG6 821 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 C4orf22Q6V702 233 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 WDR5BQ86VZ2 330 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 LONP2Q86WA8 852 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 CAMK1DQ8IU85 385 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 AADATQ8N5Z0 425 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 ZBTB44Q8NCP5 570 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 SPATA4Q8NEY3 305 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 GRIN3AQ8TCU5 1115 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 ZNF592Q92610 1267 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 ERLEC1Q96DZ1 483 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 PPP1R16AQ96I34 528 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 KLHL32Q96NJ5 620 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 RUNDC3BQ96NL0 473 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 PPP1R2P1Q96PQ5 205 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 FBXL12Q9NXK8 326 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 BCCIPQ9P287 314 aaKnown RBP eCLIP12.81□□□□□ -0.36
SYNE2-219ENST00000555323 FZD4Q9ULV1 537 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 PPIL1Q9Y3C6 166 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 ARIH1Q9Y4X5 557 aaPredicted RBP12.81□□□□□ -0.36
SYNE2-219ENST00000555323 PCDHGC4Q9Y5F7 938 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 MRFAP1Q9Y605 127 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 SHROOM3Q8TF72 1996 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 C16orf96A6NNT2 1141 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 C10orf142B7Z368 130 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 KPNA3O00505 521 aaPredicted RBP12.8□□□□□ -0.36
SYNE2-219ENST00000555323 SLC7A4O43246 635 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 PGLSO95336 258 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 PIGNO95427 931 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 PRLP01236 227 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 SP9P0CG40 484 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 TIMP2P16035 220 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 NFKB1P19838 968 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 OXTRP30559 389 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 CNR2P34972 360 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 P2RY2P41231 377 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 CD86P42081 329 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 PSMD8P48556 350 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 PXNP49023 591 aaPredicted RBP12.8□□□□□ -0.36
SYNE2-219ENST00000555323 SUOXP51687 545 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 METAP1P53582 386 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 RPL26P61254 145 aaKnown RBP12.8□□□□□ -0.36
SYNE2-219ENST00000555323 POLR2LP62875 67 aaKnown RBP12.8□□□□□ -0.36
SYNE2-219ENST00000555323 DMWDQ09019 674 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 TRAF2Q12933 501 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 MPP3Q13368 585 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 TTC31Q49AM3 519 aaPredicted RBP12.8□□□□□ -0.36
SYNE2-219ENST00000555323 ERN2Q76MJ5 926 aaKnown RBP12.8□□□□□ -0.36
SYNE2-219ENST00000555323 PGBD3Q8N328 593 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 HDDC3Q8N4P3 179 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 GLIS1Q8NBF1 620 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 RAB7BQ96AH8 199 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 ARRDC3Q96B67 414 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 GORASP1Q9BQQ3 440 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 TDRD1Q9BXT4 1180 aaKnown RBP12.8□□□□□ -0.36
SYNE2-219ENST00000555323 DDX47Q9H0S4 455 aaKnown RBP12.8□□□□□ -0.36
SYNE2-219ENST00000555323 NEUROG2Q9H2A3 272 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 KDM4CQ9H3R0 1056 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 ZSCAN32Q9NX65 697 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 WSB2Q9NYS7 404 aaPredicted RBP12.8□□□□□ -0.36
SYNE2-219ENST00000555323 PAK5Q9P286 719 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 FAM153AQ9UHL3 310 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 RSPH14Q9UHP6 348 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 RPL26L1Q9UNX3 145 aaKnown RBP12.8□□□□□ -0.36
SYNE2-219ENST00000555323 NCKAP1Q9Y2A7 1128 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 AAR2Q9Y312 384 aaKnown RBP12.8□□□□□ -0.36
SYNE2-219ENST00000555323 TTLL3Q9Y4R7 772 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 RAI2Q9Y5P3 530 aa12.8□□□□□ -0.36
SYNE2-219ENST00000555323 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.79□□□□□ -0.36
SYNE2-219ENST00000555323 LOC285095A0A1B0GVY8 99 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 A0A1W2PP55 124 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 ANXA9O76027 345 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 METTL18O95568 372 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 MT-CYBP00156 380 aaPredicted RBP12.79□□□□□ -0.36
SYNE2-219ENST00000555323 IFNB1P01574 187 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 ETS1P14921 441 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 RPL22P35268 128 aaKnown RBP12.79□□□□□ -0.36
SYNE2-219ENST00000555323 ACTN2P35609 894 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 FDFT1P37268 417 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 PTGIRP43119 386 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 FNTBP49356 437 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 CKAP4Q07065 602 aaKnown RBP12.79□□□□□ -0.36
SYNE2-219ENST00000555323 CNTN1Q12860 1018 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 PRPSAP1Q14558 356 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 UGP2Q16851 508 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 USP39Q53GS9 565 aaKnown RBP12.79□□□□□ -0.36
SYNE2-219ENST00000555323 PIP5KL1Q5T9C9 394 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 ARMC12Q5T9G4 340 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 AGBL4Q5VU57 503 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 KCTD11Q693B1 232 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 KDELC1Q6UW63 502 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 KIAA1324Q6UXG2 1013 aaKnown RBP12.79□□□□□ -0.36
SYNE2-219ENST00000555323 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.79□□□□□ -0.36
SYNE2-219ENST00000555323 ARHGEF18Q6ZSZ5 1173 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 ZSWIM9Q86XI8 627 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms