RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 SLC25A13Q9UJS0 675 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 CACNA1IQ9P0X4 2223 aa10.89□□□□□ -0.67
TDP1-211ENST00000555178 RNF40O75150 1001 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 SIN3BO75182 1162 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 PPFIA2O75334 1257 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 PRKCGP05129 697 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 TPH1P17752 444 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 WNT3AP56704 352 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 TRAF2Q12933 501 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 RFTN1Q14699 578 aaPredicted RBP10.88□□□□□ -0.67
TDP1-211ENST00000555178 C9orf64Q5T6V5 341 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.88□□□□□ -0.67
TDP1-211ENST00000555178 KLHDC8BQ8IXV7 354 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 ZNF513Q8N8E2 541 aaPredicted RBP10.88□□□□□ -0.67
TDP1-211ENST00000555178 IL17RCQ8NAC3 791 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 TADA1Q96BN2 335 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 C8orf33Q9H7E9 229 aaPredicted RBP10.88□□□□□ -0.67
TDP1-211ENST00000555178 EIF2B3Q9NR50 452 aaKnown RBP10.88□□□□□ -0.67
TDP1-211ENST00000555178 CHMP2BQ9UQN3 213 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 STARD13Q9Y3M8 1113 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.88□□□□□ -0.67
TDP1-211ENST00000555178 STON1Q9Y6Q2 735 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 VPS13AQ96RL7 3174 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 ACSL3O95573 720 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 PRLP01236 227 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 CHRNB1P11230 501 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 GLULP15104 373 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 MGAT1P26572 445 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 ADRA1AP35348 466 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 HSD17B3P37058 310 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 HSPA9P38646 679 aaKnown RBP10.88□□□□□ -0.67
TDP1-211ENST00000555178 MAGEA3P43357 314 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 CCNHP51946 323 aaPredicted RBP10.88□□□□□ -0.67
TDP1-211ENST00000555178 PMS2P54278 862 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 PFKPQ01813 784 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 GALNT3Q14435 633 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 PRPSAP1Q14558 356 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 SMAD1Q15797 465 aaKnown RBP10.88□□□□□ -0.67
TDP1-211ENST00000555178 KYNUQ16719 465 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 LRRC73Q5JTD7 316 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 ALG1LQ6GMV1 187 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 NCEH1Q6PIU2 408 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 SRLQ86TD4 932 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 STK40Q8N2I9 435 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 SLC25A41Q8N5S1 370 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 MCUQ8NE86 351 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 GRIN3AQ8TCU5 1115 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 UBLCP1Q8WVY7 318 aaPredicted RBP10.88□□□□□ -0.67
TDP1-211ENST00000555178 FAM129BQ96TA1 746 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 TBL1YQ9BQ87 522 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 SCUBE2Q9NQ36 999 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 NINJ2Q9NZG7 142 aa10.88□□□□□ -0.67
TDP1-211ENST00000555178 HECAQ9UBI9 543 aaPredicted RBP10.88□□□□□ -0.67
TDP1-211ENST00000555178 EML5Q05BV3 1969 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.87□□□□□ -0.67
TDP1-211ENST00000555178 ZNF189O75820 626 aaPredicted RBP10.87□□□□□ -0.67
TDP1-211ENST00000555178 PIAS1O75925 651 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 SUN1O94901 812 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 KLF8O95600 359 aaPredicted RBP10.87□□□□□ -0.67
TDP1-211ENST00000555178 ATP5BP06576 529 aaKnown RBP10.87□□□□□ -0.67
TDP1-211ENST00000555178 ELK3P41970 407 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 MAGEA4P43358 317 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 ARL4CP56559 192 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 CASP8Q14790 479 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 CERCAMQ5T4B2 595 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 DENND5AQ6IQ26 1287 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 PPP1R21Q6ZMI0 780 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 RYBPQ8N488 228 aaPredicted RBP10.87□□□□□ -0.67
TDP1-211ENST00000555178 TXNDC5Q8NBS9 432 aaKnown RBP10.87□□□□□ -0.67
TDP1-211ENST00000555178 FBXO36Q8NEA4 188 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 FLCNQ8NFG4 579 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 OR2AP1Q8NGE2 309 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 OR2W6PQ8NHA6 318 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 RPLP0P6Q8NHW5 317 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 FSD1LQ9BXM9 530 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 FUT8Q9BYC5 575 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 FAM129AQ9BZQ8 928 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 LRRC40Q9H9A6 602 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 PLAC1Q9HBJ0 212 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 CD248Q9HCU0 757 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 CD93Q9NPY3 652 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 PRSS16Q9NQE7 514 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 SYBUQ9NX95 663 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 FBXL21Q9UKT6 434 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 PLA2G4CQ9UP65 541 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 CHKBQ9Y259 395 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 AAR2Q9Y312 384 aaKnown RBP10.87□□□□□ -0.67
TDP1-211ENST00000555178 WASF2Q9Y6W5 498 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 SCN8AQ9UQD0 1980 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 ZDBF2Q9HCK1 2354 aa10.87□□□□□ -0.67
TDP1-211ENST00000555178 CCDC78A2IDD5 438 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 E7ESA3 106 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 ANXA9O76027 345 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 EPHX1P07099 455 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 SRPRAP08240 638 aaKnown RBP10.86□□□□□ -0.67
TDP1-211ENST00000555178 PIRTP0C851 137 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 TNFRSF4P43489 277 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 GEMP55040 296 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 SULT2A1Q06520 285 aa10.86□□□□□ -0.67
TDP1-211ENST00000555178 SLC20A2Q08357 652 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms