RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.58□□□□□ -1.52
VRK1-203ENST00000555067 PRPF39Q86UA1 669 aaKnown RBP5.58□□□□□ -1.52
VRK1-203ENST00000555067 IQCA1Q86XH1 822 aa5.58□□□□□ -1.52
VRK1-203ENST00000555067 CARNMT1Q8N4J0 409 aa5.58□□□□□ -1.52
VRK1-203ENST00000555067 SRBD1Q8N5C6 995 aaKnown RBP5.58□□□□□ -1.52
VRK1-203ENST00000555067 KCTD6Q8NC69 237 aa5.58□□□□□ -1.52
VRK1-203ENST00000555067 SLC22A17Q8WUG5 538 aa5.58□□□□□ -1.52
VRK1-203ENST00000555067 CPT1BQ92523 772 aa5.58□□□□□ -1.52
VRK1-203ENST00000555067 NPIPB3Q92617 1050 aa5.58□□□□□ -1.52
VRK1-203ENST00000555067 FEM1CQ96JP0 617 aa5.58□□□□□ -1.52
VRK1-203ENST00000555067 FUZQ9BT04 418 aa5.58□□□□□ -1.52
VRK1-203ENST00000555067 RMI1Q9H9A7 625 aa5.58□□□□□ -1.52
VRK1-203ENST00000555067 NDUFAF4Q9P032 175 aa5.58□□□□□ -1.52
VRK1-203ENST00000555067 WNT16Q9UBV4 365 aa5.58□□□□□ -1.52
VRK1-203ENST00000555067 PNMA6EA0A0J9YXQ4 647 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 C17orf113A0A1B0GUU1 675 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 GAGE12JA6NER3 117 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 EFCAB8A8MWE9 144 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 TAF5LO75529 589 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 PLA2G2AP14555 144 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 TNFRSF8P28908 595 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 EPHA8P29322 1005 aaPredicted RBP5.57□□□□□ -1.52
VRK1-203ENST00000555067 NNMTP40261 264 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 SLC37A1P57057 533 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 RPS3AP61247 264 aaKnown RBP5.57□□□□□ -1.52
VRK1-203ENST00000555067 STK4Q13043 487 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 DCTN2Q13561 401 aaKnown RBP5.57□□□□□ -1.52
VRK1-203ENST00000555067 TDGQ13569 410 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 NFIL3Q16649 462 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 PRICKLE4Q2TBC4 344 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 ZNF484Q5JVG2 852 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 SLC39A5Q6ZMH5 540 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 SPATA2LQ8IUW3 424 aaPredicted RBP5.57□□□□□ -1.52
VRK1-203ENST00000555067 AVL9Q8NBF6 648 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 MSANTD4Q8NCY6 345 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 GOT1L1Q8NHS2 421 aaPredicted RBP5.57□□□□□ -1.52
VRK1-203ENST00000555067 OIT3Q8WWZ8 545 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 ZNF347Q96SE7 839 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 PHF7Q9BWX1 381 aaPredicted RBP5.57□□□□□ -1.52
VRK1-203ENST00000555067 SEZ6LQ9BYH1 1024 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 SLC25A18Q9H1K4 315 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 SPAG4Q9NPE6 437 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 PLK2Q9NYY3 685 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 MDFICQ9P1T7 246 aa5.57□□□□□ -1.52
VRK1-203ENST00000555067 KIF28PB7ZC32 967 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 C19orf81C9J6K1 198 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 UBE2CO00762 179 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 ACOT8O14734 319 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 TGDSO95455 350 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 NFATC1O95644 943 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 KLKB1P03952 638 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 PSMA4P25789 261 aaKnown RBP5.56□□□□□ -1.52
VRK1-203ENST00000555067 ABCD1P33897 745 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 HARS2P49590 506 aaKnown RBP5.56□□□□□ -1.52
VRK1-203ENST00000555067 PPARDQ03181 441 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 DCTN1Q14203 1278 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 TMEM266Q2M3C6 531 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 C1orf141Q5JVX7 400 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 GPR139Q6DWJ6 353 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 CAPRIN2Q6IMN6 1127 aaKnown RBP5.56□□□□□ -1.52
VRK1-203ENST00000555067 ZNF449Q6P9G9 518 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 PARM1Q6UWI2 310 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 IKBIPQ70UQ0 350 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 CEP57L1Q8IYX8 460 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 TAGAPQ8N103 731 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 METTL6Q8TCB7 284 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 WDR60Q8WVS4 1066 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 MED30Q96HR3 178 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 GPATCH1Q9BRR8 931 aaKnown RBP5.56□□□□□ -1.52
VRK1-203ENST00000555067 FTOQ9C0B1 505 aaKnown RBP eCLIP5.56□□□□□ -1.52
VRK1-203ENST00000555067 HIF1ANQ9NWT6 349 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 ZDHHC7Q9NXF8 308 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 TAS2R10Q9NYW0 307 aa5.56□□□□□ -1.52
VRK1-203ENST00000555067 CNOT7Q9UIV1 285 aaKnown RBP5.56□□□□□ -1.52
VRK1-203ENST00000555067 GPRASP1Q5JY77 1395 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 C3orf70A6NLC5 250 aaPredicted RBP5.55□□□□□ -1.52
VRK1-203ENST00000555067 FOXO6A8MYZ6 492 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 SH2B2O14492 632 aaPredicted RBP5.55□□□□□ -1.52
VRK1-203ENST00000555067 TNPO2O14787 897 aaKnown RBP5.55□□□□□ -1.52
VRK1-203ENST00000555067 RPP40O75818 363 aaKnown RBP5.55□□□□□ -1.52
VRK1-203ENST00000555067 BAG2O95816 211 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 FAM200BP0CF97 657 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 ATP6V1B1P15313 513 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 TM4SF1P30408 202 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 PIK3CAP42336 1068 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 MCM2P49736 904 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 LTBQ06643 244 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 EPS8Q12929 822 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 CAMK1Q14012 370 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 DNAJC21Q5F1R6 531 aaKnown RBP5.55□□□□□ -1.52
VRK1-203ENST00000555067 NAA35Q5VZE5 725 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 INO80CQ6PI98 192 aaPredicted RBP5.55□□□□□ -1.52
VRK1-203ENST00000555067 RTL10Q7L3V2 364 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 RASGRP2Q7LDG7 609 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 CEP97Q8IW35 865 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 C17orf53Q8N3J3 647 aaPredicted RBP5.55□□□□□ -1.52
VRK1-203ENST00000555067 LINS1Q8NG48 757 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 NFKBIDQ8NI38 313 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 HMGB4Q8WW32 186 aa5.55□□□□□ -1.52
VRK1-203ENST00000555067 INPP5DQ92835 1189 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms