RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 LCTP09848 1927 aa16.74■□□□□ 0.27
PCNX1-209ENST00000554879 ABHD14A-ACY1A0A1B0GW23 586 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 SRRM3A6NNA2 597 aaPredicted RBP16.73■□□□□ 0.27
PCNX1-209ENST00000554879 HAPLN1P10915 354 aaPredicted RBP16.73■□□□□ 0.27
PCNX1-209ENST00000554879 DSC1Q08554 894 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 DNAJB7Q7Z6W7 309 aaPredicted RBP16.73■□□□□ 0.27
PCNX1-209ENST00000554879 LPCAT1Q8NF37 534 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 HAPLN3Q96S86 360 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 PAIP1Q9H074 479 aaKnown RBP16.73■□□□□ 0.27
PCNX1-209ENST00000554879 SCUBE2Q9NQ36 999 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 FAM8A1Q9UBU6 413 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 PRELID1Q9Y255 219 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 PCDHA11Q9Y5I1 949 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 A8MX80 341 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 ADH1AP07327 375 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 TPSB2P20231 275 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 CHRNA4P43681 627 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 ARFIP2P53365 341 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 TPSAB1Q15661 275 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 CNGA3Q16281 694 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 TXNDC8Q6A555 127 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 MFSD5Q6N075 450 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 LINGO4Q6UY18 593 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 TMEM175Q9BSA9 504 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 SHCBP1LQ9BZQ2 653 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 CLUHO75153 1309 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 GP5P40197 560 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 CYP4F8P98187 520 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 DSC2Q02487 901 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 UGP2Q16851 508 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 PABPC1LQ4VXU2 614 aaKnown RBP16.73■□□□□ 0.27
PCNX1-209ENST00000554879 ZCCHC23Q6ZST2 131 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 EMILIN2Q9BXX0 1053 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 SLCO1B3Q9NPD5 702 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 AFF4Q9UHB7 1163 aaKnown RBP16.73■□□□□ 0.27
PCNX1-209ENST00000554879 CCL22O00626 93 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 NCF2P19878 526 aaPredicted RBP16.73■□□□□ 0.27
PCNX1-209ENST00000554879 NPY2RP49146 381 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 STX3Q13277 289 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 ZNF461Q8TAF7 563 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 KLHL25Q9H0H3 589 aa16.73■□□□□ 0.27
PCNX1-209ENST00000554879 ZFP37Q9Y6Q3 630 aaPredicted RBP16.73■□□□□ 0.27
PCNX1-209ENST00000554879 GJB5O95377 273 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 RHOQP17081 205 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 NSUN2Q08J23 767 aaKnown RBP eCLIP16.72■□□□□ 0.27
PCNX1-209ENST00000554879 CTBP1Q13363 440 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 TMEM53Q6P2H8 277 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 OR6K2Q8NGY2 324 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 E2F7Q96AV8 911 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 TEKT5Q96M29 485 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 MAGEB18Q96M61 343 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 GPR63Q9BZJ6 419 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 POLR1EQ9GZS1 481 aaKnown RBP16.72■□□□□ 0.27
PCNX1-209ENST00000554879 IL22Q9GZX6 179 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 SLC17A7Q9P2U7 560 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 PHGDHO43175 533 aaKnown RBP16.72■□□□□ 0.27
PCNX1-209ENST00000554879 ACSL4O60488 711 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 ALFQ53S48 1182 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 ARCQ7LC44 396 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 SATL1Q86VE3 508 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 FARP1Q9Y4F1 1045 aaPredicted RBP16.72■□□□□ 0.27
PCNX1-209ENST00000554879 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.72■□□□□ 0.27
PCNX1-209ENST00000554879 J3KR12 359 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 CCDC166P0CW27 439 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 PAFAH1B3Q15102 231 aaKnown RBP16.72■□□□□ 0.27
PCNX1-209ENST00000554879 INAQ16352 499 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 TMEM259Q4ZIN3 620 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 ARID3BQ8IVW6 561 aaPredicted RBP16.72■□□□□ 0.27
PCNX1-209ENST00000554879 SPOCK2Q92563 424 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 MTBPQ96DY7 904 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 CNBD2Q96M20 576 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 TCF25Q9BQ70 676 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 MRPL1Q9BYD6 325 aaKnown RBP16.72■□□□□ 0.27
PCNX1-209ENST00000554879 OSBPL2Q9H1P3 480 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 GBA3Q9H227 469 aa16.72■□□□□ 0.27
PCNX1-209ENST00000554879 ERI2A8K979 691 aaKnown RBP16.71■□□□□ 0.27
PCNX1-209ENST00000554879 AP2A1O95782 977 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 KCNA4P22459 653 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 SEMA5AQ13591 1074 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 WASHC2DQ5SRD0 308 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 CMC1Q7Z7K0 106 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 GALNT4Q8N4A0 578 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 TUBGCP5Q96RT8 1024 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 ASAH2Q9NR71 780 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.71■□□□□ 0.27
PCNX1-209ENST00000554879 ITM2BQ9Y287 266 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 CXorf49A8MYA2 514 aaPredicted RBP16.71■□□□□ 0.27
PCNX1-209ENST00000554879 ATXN3P54252 364 aaPredicted RBP16.71■□□□□ 0.27
PCNX1-209ENST00000554879 GALNT3Q14435 633 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 ARHGAP15Q53QZ3 475 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 ZRANB3Q5FWF4 1079 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 SPANXN3Q5MJ09 141 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 N4BP2L1Q5TBK1 243 aaPredicted RBP16.71■□□□□ 0.27
PCNX1-209ENST00000554879 PM20D1Q6GTS8 502 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 FBXO46Q6PJ61 603 aaPredicted RBP16.71■□□□□ 0.27
PCNX1-209ENST00000554879 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.71■□□□□ 0.27
PCNX1-209ENST00000554879 TPP1O14773 563 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 PEX11AO75192 247 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 NNMTP40261 264 aa16.71■□□□□ 0.27
PCNX1-209ENST00000554879 PGFP49763 221 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms