RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 SLC39A8Q9C0K1 460 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 MID1IP1Q9NPA3 183 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 STK39Q9UEW8 545 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 ST3GAL5Q9UNP4 418 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 ARID2Q68CP9 1835 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 NRCAMQ92823 1304 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 LAMA3Q16787 3333 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 C17orf102A2RUQ5 167 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 MATN2O00339 956 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 HARS2P49590 506 aaKnown RBP11.97□□□□□ -0.49
XRCC3-208ENST00000554811 ECT2LQ008S8 904 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 DSC2Q02487 901 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 ARHGAP18Q8N392 663 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 NAT16Q8N8M0 369 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 MAML3Q96JK9 1138 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 C1orf50Q9BV19 199 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 COQ10BQ9H8M1 238 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 ETAA1Q9NY74 926 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 IGSF9Q9P2J2 1179 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 FBXW11Q9UKB1 542 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 TIMM22Q9Y584 194 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 AP4S1Q9Y587 144 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 PPP2R3BQ9Y5P8 575 aa11.97□□□□□ -0.49
XRCC3-208ENST00000554811 DNAJC25-GNG10A0A024R161 153 aa11.96□□□□□ -0.49
XRCC3-208ENST00000554811 DCLK1O15075 740 aa11.96□□□□□ -0.49
XRCC3-208ENST00000554811 ANGPT2O15123 496 aa11.96□□□□□ -0.49
XRCC3-208ENST00000554811 LINC00032P0C843 101 aa11.96□□□□□ -0.49
XRCC3-208ENST00000554811 NPY2RP49146 381 aa11.96□□□□□ -0.49
XRCC3-208ENST00000554811 PSEN2P49810 448 aa11.96□□□□□ -0.49
XRCC3-208ENST00000554811 PPIL2Q13356 520 aa11.96□□□□□ -0.49
XRCC3-208ENST00000554811 VPS26BQ4G0F5 336 aa11.96□□□□□ -0.49
XRCC3-208ENST00000554811 ZYG11AQ6WRX3 759 aa11.96□□□□□ -0.49
XRCC3-208ENST00000554811 PAQR9Q6ZVX9 377 aa11.96□□□□□ -0.49
XRCC3-208ENST00000554811 C3orf58Q8NDZ4 430 aa11.96□□□□□ -0.49
XRCC3-208ENST00000554811 ERLEC1Q96DZ1 483 aa11.96□□□□□ -0.49
XRCC3-208ENST00000554811 CCDC97Q96F63 343 aaPredicted RBP11.96□□□□□ -0.49
XRCC3-208ENST00000554811 KCNA7Q96RP8 456 aa11.96□□□□□ -0.49
XRCC3-208ENST00000554811 AAR2Q9Y312 384 aaKnown RBP11.96□□□□□ -0.49
XRCC3-208ENST00000554811 A0A0U1RQS6 177 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 HEATR9A2RTY3 570 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 PIRO00625 290 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 PPP6CO00743 305 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 GJB3O75712 270 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 RNASEH2AO75792 299 aaKnown RBP11.96□□□□□ -0.5
XRCC3-208ENST00000554811 CABYRO75952 493 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 HLA-DQB2P05538 268 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 GABRB3P28472 473 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 DYNC1I2Q13409 638 aaKnown RBP11.96□□□□□ -0.5
XRCC3-208ENST00000554811 INSCQ1MX18 579 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 TIGD5Q53EQ6 642 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 PCID2Q5JVF3 399 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 STEAP4Q687X5 459 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 PKN3Q6P5Z2 889 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 PLEKHH3Q7Z736 793 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 CUZD1Q86UP6 607 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 GRIN3AQ8TCU5 1115 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 TRPC4APQ8TEL6 797 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 RPRD1AQ96P16 312 aaPredicted RBP11.96□□□□□ -0.5
XRCC3-208ENST00000554811 MIOSQ9NXC5 875 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 H3BSA7 217 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 INPP4BO15327 924 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 ANXA9O76027 345 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 ALDH1A2O94788 518 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 FYNP06241 537 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 CDKL1Q00532 357 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 TSPY1Q01534 308 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 DPYSQ14117 519 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 DNAJC14Q6Y2X3 702 aaPredicted RBP11.96□□□□□ -0.5
XRCC3-208ENST00000554811 LINC00523Q86TU6 105 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 HERC6Q8IVU3 1022 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 OFCC1Q8IZS5 231 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 CFAP52Q8N1V2 620 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 RP9Q8TA86 221 aaKnown RBP11.96□□□□□ -0.5
XRCC3-208ENST00000554811 SMARCD1Q96GM5 515 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 KLHL32Q96NJ5 620 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 C1orf21Q9H246 121 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 SOX17Q9H6I2 414 aaPredicted RBP11.96□□□□□ -0.5
XRCC3-208ENST00000554811 RGS18Q9NS28 235 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 UBAP1Q9NZ09 502 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 FAM8A1Q9UBU6 413 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 ASB3Q9Y575 518 aa11.96□□□□□ -0.5
XRCC3-208ENST00000554811 GRID2O43424 1007 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 PRSS56P0CW18 603 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 NCK1P16333 377 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 ITGB6P18564 788 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 PCSK1P29120 753 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 DPP6P42658 865 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 GALK1P51570 392 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 ZIK1Q3SY52 487 aaPredicted RBP11.95□□□□□ -0.5
XRCC3-208ENST00000554811 SLC39A12Q504Y0 691 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 SGO1Q5FBB7 561 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 AGAP9Q5VTM2 703 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 OTUD1Q5VV17 481 aaPredicted RBP11.95□□□□□ -0.5
XRCC3-208ENST00000554811 ARHGAP22Q7Z5H3 698 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 SPPL2CQ8IUH8 684 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 CENPIQ92674 756 aaPredicted RBP11.95□□□□□ -0.5
XRCC3-208ENST00000554811 EFHD1Q9BUP0 239 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 FAM192AQ9GZU8 254 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 DRC3Q9H069 523 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 ADAMTS10Q9H324 1103 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms