RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ANKRD22Q5VYY1 191 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 SLC8B1Q6J4K2 584 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 LIMS2Q7Z4I7 341 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 LCA5Q86VQ0 697 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 OSTM1Q86WC4 334 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 UNC45BQ8IWX7 931 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 TCEAL8Q8IYN2 117 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 KBTBD7Q8WVZ9 684 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 TTC17Q96AE7 1141 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 SENP8Q96LD8 212 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 TWNKQ96RR1 684 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 FAM118BQ9BPY3 351 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 CALN1Q9BXU9 219 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 ELOVL4Q9GZR5 314 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 KCNK13Q9HB14 408 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 METTL5Q9NRN9 209 aaKnown RBP11.3□□□□□ -0.6
SRP54-205ENST00000554803 GDAP2Q9NXN4 497 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 DDX43Q9NXZ2 648 aaKnown RBP11.3□□□□□ -0.6
SRP54-205ENST00000554803 MID2Q9UJV3 735 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 MAFFQ9ULX9 164 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 CHMP2BQ9UQN3 213 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 TTLL3Q9Y4R7 772 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 INSL5Q9Y5Q6 135 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 FAM170AA1A519 330 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 CAPN14A8MX76 684 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 TRIM49D1C9J1S8 452 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 GOLGA8SH3BPF8 625 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 H7C0C1 242 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 AP3B1O00203 1094 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 CYB561D2O14569 222 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 PRRG1O14668 218 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 SYN3O14994 580 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 DCLK1O15075 740 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 GLRA3O75311 464 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 SNUPNO95149 360 aaKnown RBP11.29□□□□□ -0.6
SRP54-205ENST00000554803 SEC24AO95486 1093 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 MYL2P10916 166 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 GJA1P17302 382 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 ACAT1P24752 427 aaKnown RBP11.29□□□□□ -0.6
SRP54-205ENST00000554803 SERPINB3P29508 390 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 PGM1P36871 562 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 GPD2P43304 727 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 PTPN9P43378 593 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 ATP5OP48047 213 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 PSEN1P49768 467 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 NDST1P52848 882 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 GDF10P55107 478 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 YWHAZP63104 245 aaKnown RBP11.29□□□□□ -0.6
SRP54-205ENST00000554803 DYNLT1P63172 113 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 SIM1P81133 766 aaPredicted RBP11.29□□□□□ -0.6
SRP54-205ENST00000554803 SCAPQ12770 1279 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 FAM102AQ5T9C2 384 aaPredicted RBP11.29□□□□□ -0.6
SRP54-205ENST00000554803 TMCO4Q5TGY1 634 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 SNX30Q5VWJ9 437 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 STEAP4Q687X5 459 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 TXNRD3NBQ6F5E7 133 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 DSTYKQ6XUX3 929 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 LRRC74BQ6ZQY2 392 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 MARK2Q7KZI7 788 aaKnown RBP11.29□□□□□ -0.6
SRP54-205ENST00000554803 PIP4P1Q86T03 277 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 PRUNE1Q86TP1 453 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 ARFGAP1Q8N6T3 406 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 PDCD7Q8N8D1 485 aaKnown RBP11.29□□□□□ -0.6
SRP54-205ENST00000554803 LEMD2Q8NC56 503 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 JOSD2Q8TAC2 188 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 TTC8Q8TAM2 541 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 FAM111AQ96PZ2 611 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 CPXM1Q96SM3 734 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 ZNF184Q99676 751 aaPredicted RBP11.29□□□□□ -0.6
SRP54-205ENST00000554803 MIPEPQ99797 713 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 EBNA1BP2Q99848 306 aaKnown RBP11.29□□□□□ -0.6
SRP54-205ENST00000554803 SH3GL3Q99963 347 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 LPIN3Q9BQK8 851 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 OXCT2Q9BYC2 517 aaPredicted RBP11.29□□□□□ -0.6
SRP54-205ENST00000554803 CYP4F11Q9HBI6 524 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 USP29Q9HBJ7 922 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 POPDC2Q9HBU9 364 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 RAB6BQ9NRW1 208 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 ARL8BQ9NVJ2 186 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 TAS2R1Q9NYW7 299 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 GTSE1Q9NYZ3 720 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 HACD3Q9P035 362 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 SLC17A7Q9P2U7 560 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 NKX1-2Q9UD57 310 aaPredicted RBP11.29□□□□□ -0.6
SRP54-205ENST00000554803 DCDC2Q9UHG0 476 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 BCAP29Q9UHQ4 241 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 TIMM13Q9Y5L4 95 aaPredicted RBP11.29□□□□□ -0.6
SRP54-205ENST00000554803 RAD54BQ9Y620 910 aa11.29□□□□□ -0.6
SRP54-205ENST00000554803 SPAARA0A1B0GVQ0 90 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 FOXO6A8MYZ6 492 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 PATE3B3GLJ2 98 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 GOLGA8MH3BSY2 632 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 H7C4K7 107 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 M0QYV0 167 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 SLC22A2O15244 555 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 ALDH1A2O94788 518 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 C1QAP02745 245 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 BPGMP07738 259 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms