RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 ITPKCQ96DU7 683 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ELMO2Q96JJ3 720 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ACAP3Q96P50 834 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 FNBP1Q96RU3 617 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 WRNIP1Q96S55 665 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 RAD9AQ99638 391 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 PTPN18Q99952 460 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 EBF4Q9BQW3 602 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ADPGKQ9BRR6 497 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 TSEN34Q9BSV6 310 aaKnown RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 SPATA9Q9BWV2 254 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 SLC25A51Q9H1U9 297 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 TNFRSF12AQ9NP84 129 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 MRPL40Q9NQ50 206 aaKnown RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 SMOXQ9NWM0 555 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 FLRT1Q9NZU1 646 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 DMTF1Q9Y222 760 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 MFHAS1Q9Y4C4 1052 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 KPNA7A9QM74 516 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 PRR5-ARHGAP8B1AHC4 643 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 H3BRJ5 948 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 TRIM38O00635 465 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 TNPO2O14787 897 aaKnown RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 HDAC3O15379 428 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 SLC16A6O15403 523 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 LILRB3O75022 631 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ZMPSTE24O75844 475 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 RAD17O75943 681 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 CCDC166P0CW27 439 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 JAK1P23458 1154 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 RAP1GAPP47736 663 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 EEFSECP57772 596 aaKnown RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 IRX3P78415 501 aaPredicted RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 LACTBP83111 547 aaPredicted RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ARHGAP8P85298 464 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 EFNB1P98172 346 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 MPP1Q00013 466 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 PRKAA1Q13131 559 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 IRF3Q14653 427 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 SPCS2Q15005 226 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 C15orf59Q2T9L4 293 aaPredicted RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 SLC9B1Q4ZJI4 515 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 SLC25A30Q5SVS4 291 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 XAF1Q6GPH4 301 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 SEPT14Q6ZU15 432 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ERMP1Q7Z2K6 904 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 GPRIN1Q7Z2K8 1008 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 PIWIL4Q7Z3Z4 852 aaKnown RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 NLRP8Q86W28 1048 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 PGBD5Q8N414 524 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 DCLK2Q8N568 766 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 NLRP7Q8WX94 980 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 LINC01599Q8WXQ3 324 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 TRIB2Q92519 343 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 N4BP2L2Q92802 583 aaPredicted RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 USP7Q93009 1102 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 RSRC1Q96IZ7 334 aaKnown RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 OMDQ99983 421 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 FERMT1Q9BQL6 677 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 TMEM175Q9BSA9 504 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 EIF2AQ9BY44 585 aaKnown RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 TRIM54Q9BYV2 358 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ACTL8Q9H568 366 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 SYNDIG1Q9H7V2 258 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 NTN4Q9HB63 628 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.48□□□□□ -1.852e-16■■■■■ 307.4
SEC23A-207ENST00000554615 ENTPD7Q9NQZ7 604 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ZC3H7BQ9UGR2 993 aaKnown RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF225Q9UK10 706 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 PTPN22Q9Y2R2 807 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 GJA3Q9Y6H8 435 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 CEP192Q8TEP8 1941 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 NRP1O14786 923 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 AKAP10O43572 662 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 DLX3O60479 287 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ENTPD5O75356 428 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ERGP11308 486 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 CD1EP15812 388 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 PTPN1P18031 435 aaKnown RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 EMX2Q04743 252 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 IL18R1Q13478 541 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 SLC12A1Q13621 1099 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 LAMB3Q13751 1172 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 MGAT5BQ3V5L5 792 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 UNC50Q53HI1 259 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 FBXO47Q5MNV8 452 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 LGSNQ5TDP6 509 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 BLOC1S3Q6QNY0 202 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 C16orf89Q6UX73 402 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 DLEU7Q6UYE1 221 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 C14orf80Q86SX3 495 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 TBC1D1Q86TI0 1168 aaPredicted RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ISCA2Q86U28 154 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 FAM35AQ86V20 835 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 CILP2Q8IUL8 1156 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ERI1Q8IV48 349 aaKnown RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 C10orf107Q8IVU9 208 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 LGI2Q8N0V4 545 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms