RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 TMEM60Q9H2L4 133 aa5.17□□□□□ -1.58
ATXN3-228ENST00000554592 FSCN3Q9NQT6 498 aa5.17□□□□□ -1.58
ATXN3-228ENST00000554592 MAGED2Q9UNF1 606 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-228ENST00000554592 VWA7Q9Y334 891 aa5.17□□□□□ -1.58
ATXN3-228ENST00000554592 RAI2Q9Y5P3 530 aa5.17□□□□□ -1.58
ATXN3-228ENST00000554592 COL4A2P08572 1712 aa5.17□□□□□ -1.58
ATXN3-228ENST00000554592 GREB1Q4ZG55 1949 aa5.17□□□□□ -1.58
ATXN3-228ENST00000554592 RALGAPA1Q6GYQ0 2036 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 TCRBV21S2A2A0A5A6 115 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 E9PAM4 449 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 CYB561D2O14569 222 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 SLC9A3R1O14745 358 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-228ENST00000554592 CAPN9O14815 690 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 SLC16A4O15374 487 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 PFKFB2O60825 505 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 CBFA2T3O75081 653 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 ZNF217O75362 1048 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 NOL4O94818 638 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 KAT7O95251 611 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 PRB1P04280 392 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 APODP05090 189 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 CXCL8P10145 99 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 MCM7P33993 719 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 EIF2DP41214 584 aaKnown RBP5.16□□□□□ -1.58
ATXN3-228ENST00000554592 MATR3P43243 847 aaKnown RBP eCLIP5.16□□□□□ -1.58
ATXN3-228ENST00000554592 ABCG1P45844 678 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 SELENOPP49908 381 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 PDE6CP51160 858 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 TSPY1Q01534 308 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 MGAT2Q10469 447 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 ORC2Q13416 577 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-228ENST00000554592 GBX1Q14549 363 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 PDIA5Q14554 519 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 GRM3Q14832 879 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 NOMO1Q15155 1222 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 MAP9Q49MG5 647 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 WDR45BQ5MNZ6 344 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 SYCP2LQ5T4T6 812 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 EMC10Q5UCC4 262 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 C9orf57Q5W0N0 161 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 KLHDC10Q6PID8 442 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 TRMT11Q7Z4G4 463 aaKnown RBP5.16□□□□□ -1.58
ATXN3-228ENST00000554592 CLEC14AQ86T13 490 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 GRAMD1CQ8IYS0 662 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 GPR135Q8IZ08 494 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 DAW1Q8N136 415 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 GALNT15Q8N3T1 639 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 DEFB119Q8N690 84 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 ARL14EPQ8N8R7 260 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-228ENST00000554592 TRIML1Q8N9V2 468 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 GPR156Q8NFN8 814 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 SPATA18Q8TC71 538 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 SETD7Q8WTS6 366 aaKnown RBP5.16□□□□□ -1.58
ATXN3-228ENST00000554592 HOXB13Q92826 284 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-228ENST00000554592 MVB12AQ96EY5 273 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 ZNF419Q96HQ0 510 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-228ENST00000554592 SLC22A12Q96S37 553 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 PI4K2AQ9BTU6 479 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 TIPINQ9BVW5 301 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 TM6SF1Q9BZW5 370 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 OR10A2Q9H208 303 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 RPF1Q9H9Y2 349 aaKnown RBP5.16□□□□□ -1.58
ATXN3-228ENST00000554592 TRPC7Q9HCX4 862 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 PDRG1Q9NUG6 133 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 GCNT4Q9P109 453 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 ORC3Q9UBD5 711 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-228ENST00000554592 ARHGAP26Q9UNA1 814 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 DERAQ9Y315 318 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 TESMINQ9Y4I5 508 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 SLC30A1Q9Y6M5 507 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 ATXN2Q99700 1313 aaKnown RBP5.16□□□□□ -1.58
ATXN3-228ENST00000554592 ASXL3Q9C0F0 2248 aa5.16□□□□□ -1.58
ATXN3-228ENST00000554592 TDRD15B5MCY1 1934 aaKnown RBP5.15□□□□□ -1.58
ATXN3-228ENST00000554592 ANO9A1A5B4 782 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 PMS2P1A4D2B8 440 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 C2orf78A6NCI8 922 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 TBC1D3BA6NDS4 549 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 ANTXRLA6NF34 631 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-228ENST00000554592 H0YCG3 227 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 J3QKU1 62 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 PPEF2O14830 753 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 EPB41L2O43491 1005 aaKnown RBP5.15□□□□□ -1.59
ATXN3-228ENST00000554592 AKR1B10O60218 316 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 C1QL1O75973 258 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 REC8O95072 547 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 CTDNEP1O95476 244 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 LTA4HP09960 611 aaKnown RBP5.15□□□□□ -1.59
ATXN3-228ENST00000554592 OR52Z1P0C646 297 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 ZNF883P0CG24 379 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 FDPSP14324 419 aaKnown RBP5.15□□□□□ -1.59
ATXN3-228ENST00000554592 TAF6P49848 677 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 MEF2AQ02078 507 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-228ENST00000554592 IL10RAQ13651 578 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 GALEQ14376 348 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 KCNB1Q14721 858 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 PREPLQ4J6C6 727 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-228ENST00000554592 ZC2HC1CQ53FD0 456 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-228ENST00000554592 SDHAF4Q5VUM1 108 aa5.15□□□□□ -1.59
ATXN3-228ENST00000554592 WSCD1Q658N2 575 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms