RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 VOPP1Q96AW1 172 aa19■□□□□ 0.63
CPSF2-203ENST00000554290 CENPTQ96BT3 561 aa19■□□□□ 0.63
CPSF2-203ENST00000554290 HMCESQ96FZ2 354 aa19■□□□□ 0.63
CPSF2-203ENST00000554290 IL12RB2Q99665 862 aa19■□□□□ 0.63
CPSF2-203ENST00000554290 CPEB1Q9BZB8 566 aaKnown RBP19■□□□□ 0.63
CPSF2-203ENST00000554290 SPASTQ9UBP0 616 aa19■□□□□ 0.63
CPSF2-203ENST00000554290 SALL4Q9UJQ4 1053 aa19■□□□□ 0.63
CPSF2-203ENST00000554290 LY6G6EA0A0G2JKS1 128 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 TPP1O14773 563 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 SPINT1O43278 529 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 MMP20O60882 483 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 MYF5P13349 255 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 ELP6Q0PNE2 266 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 GRM3Q14832 879 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 LRRC73Q5JTD7 316 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 PPP1R15BQ5SWA1 713 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 VPS36Q86VN1 386 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 MCOLN2Q8IZK6 566 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 LSMEM2Q8N112 164 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 IFI44Q8TCB0 444 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 MAPK15Q8TD08 544 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 HCAR2Q8TDS4 363 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 CRELD1Q96HD1 420 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 VCPIP1Q96JH7 1222 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 NCAPGQ9BPX3 1015 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 KLC2Q9H0B6 622 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 KLF15Q9UIH9 416 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 U3KQA8 63 aa18.99■□□□□ 0.63
CPSF2-203ENST00000554290 TIMP2P16035 220 aa18.98■□□□□ 0.63
CPSF2-203ENST00000554290 TNFAIP3P21580 790 aa18.98■□□□□ 0.63
CPSF2-203ENST00000554290 TPI1P60174 286 aa18.98■□□□□ 0.63
CPSF2-203ENST00000554290 EIF2B5Q13144 721 aaKnown RBP18.98■□□□□ 0.63
CPSF2-203ENST00000554290 DEFB133Q30KQ1 61 aa18.98■□□□□ 0.63
CPSF2-203ENST00000554290 TBC1D25Q3MII6 688 aa18.98■□□□□ 0.63
CPSF2-203ENST00000554290 TPRG1LQ5T0D9 272 aa18.98■□□□□ 0.63
CPSF2-203ENST00000554290 GLMNQ92990 594 aa18.98■□□□□ 0.63
CPSF2-203ENST00000554290 TBATAQ96M53 351 aa18.98■□□□□ 0.63
CPSF2-203ENST00000554290 SLC13A1Q9BZW2 595 aa18.98■□□□□ 0.63
CPSF2-203ENST00000554290 UBA2Q9UBT2 640 aaPredicted RBP18.98■□□□□ 0.63
CPSF2-203ENST00000554290 APOBEC3BQ9UH17 382 aaKnown RBP18.98■□□□□ 0.63
CPSF2-203ENST00000554290 PCDHB1Q9Y5F3 818 aa18.98■□□□□ 0.63
CPSF2-203ENST00000554290 CPED1A4D0V7 1026 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 USP12O75317 370 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 CSO75390 466 aaKnown RBP18.97■□□□□ 0.63
CPSF2-203ENST00000554290 IGFALSP35858 605 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 RPIAP49247 311 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 NDST2P52849 883 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 CDKN3Q16667 212 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 KLHL40Q2TBA0 621 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 PRRT3Q5FWE3 981 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 FAXCQ5TGI0 409 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 APTXQ7Z2E3 356 aaKnown RBP18.97■□□□□ 0.63
CPSF2-203ENST00000554290 DNAAF5Q86Y56 855 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 NETO2Q8NC67 525 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 TPCN2Q8NHX9 752 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 WRAP53Q9BUR4 548 aaKnown RBP18.97■□□□□ 0.63
CPSF2-203ENST00000554290 PARVAQ9NVD7 372 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 LHX3Q9UBR4 397 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 MYO6Q9UM54 1294 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 CHD5Q8TDI0 1954 aa18.97■□□□□ 0.63
CPSF2-203ENST00000554290 MYLKQ15746 1914 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 IGSF10Q6WRI0 2623 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 TMEM110-MUSTN1A8MSY1 372 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 EIF3CLB5ME19 914 aaKnown RBP18.96■□□□□ 0.63
CPSF2-203ENST00000554290 ANXA6P08133 673 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 EIF4A3P38919 411 aaKnown RBP18.96■□□□□ 0.63
CPSF2-203ENST00000554290 NCAPHQ15003 741 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 CYTH1Q15438 398 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 NR0B2Q15466 257 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 TMEM52BQ4KMG9 183 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 CFAP58Q5T655 872 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 MACC1Q6ZN28 852 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 IRF2BP2Q7Z5L9 587 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 PHACTR4Q8IZ21 702 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 AOPEPQ8N6M6 819 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 GRAMD1AQ96CP6 724 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 EXOC2Q96KP1 924 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 ZNF578Q96N58 590 aaPredicted RBP18.96■□□□□ 0.63
CPSF2-203ENST00000554290 UBL7Q96S82 380 aaPredicted RBP18.96■□□□□ 0.63
CPSF2-203ENST00000554290 EIF3CQ99613 913 aaKnown RBP18.96■□□□□ 0.63
CPSF2-203ENST00000554290 NAT10Q9H0A0 1025 aaKnown RBP18.96■□□□□ 0.63
CPSF2-203ENST00000554290 SUV39H2Q9H5I1 410 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 MBNL1Q9NR56 388 aaKnown RBP18.96■□□□□ 0.63
CPSF2-203ENST00000554290 AP4E1Q9UPM8 1137 aa18.96■□□□□ 0.63
CPSF2-203ENST00000554290 EME2A4GXA9 379 aaPredicted RBP18.95■□□□□ 0.62
CPSF2-203ENST00000554290 ARHGAP42A6NI28 874 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 INSIG1O15503 277 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 DAPK3O43293 454 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 MBD3O95983 291 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 MPOP05164 745 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 ITIH2P19823 946 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 PSMA2P25787 234 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 LSSP48449 732 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 PEX5P50542 639 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 BLKP51451 505 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 ADKP55263 362 aaKnown RBP18.95■□□□□ 0.62
CPSF2-203ENST00000554290 GABREP78334 506 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 OGDHQ02218 1023 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 PPARDQ03181 441 aa18.95■□□□□ 0.62
CPSF2-203ENST00000554290 CCDC173Q0VFZ6 552 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms