RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 UBLCP1Q8WVY7 318 aaPredicted RBP7.73□□□□□ -1.17
TDP1-209ENST00000554180 PEX13Q92968 403 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 CHFRQ96EP1 664 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 STAMBPL1Q96FJ0 436 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 IFT43Q96FT9 208 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 LRIG1Q96JA1 1093 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 EXOC2Q96KP1 924 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 RPL10LQ96L21 214 aaKnown RBP7.73□□□□□ -1.17
TDP1-209ENST00000554180 PWWP2AQ96N64 755 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 RANBP9Q96S59 729 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 SRPK1Q96SB4 655 aaKnown RBP7.73□□□□□ -1.17
TDP1-209ENST00000554180 P2RY13Q9BPV8 354 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 WDR83Q9BRX9 315 aaKnown RBP7.73□□□□□ -1.17
TDP1-209ENST00000554180 FICDQ9BVA6 458 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 ADGRE3Q9BY15 652 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 TM6SF2Q9BZW4 377 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 ATP13A3Q9H7F0 1226 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 PPCSQ9HAB8 311 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 MRM3Q9HC36 420 aaKnown RBP7.73□□□□□ -1.17
TDP1-209ENST00000554180 SAMD15Q9P1V8 674 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 PLA2G4CQ9UP65 541 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 CHMP2BQ9UQN3 213 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 STARD13Q9Y3M8 1113 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 XIRP2A4UGR9 3374 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 A0A087WUV0 522 aaPredicted RBP7.72□□□□□ -1.17
TDP1-209ENST00000554180 EDDM13A0A1B0GTR0 161 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 FAM237BA0A1B0GVD1 139 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 HEATR9A2RTY3 570 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 TBC1D3BA6NDS4 549 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 LOC730098B7Z3J9 87 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 TRAFD1O14545 582 aaPredicted RBP7.72□□□□□ -1.17
TDP1-209ENST00000554180 HTRA2O43464 458 aaPredicted RBP7.72□□□□□ -1.17
TDP1-209ENST00000554180 FZD6O60353 706 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 USP12O75317 370 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 BANF1O75531 89 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 TCEA3O75764 348 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 PAPSS2O95340 614 aaPredicted RBP7.72□□□□□ -1.17
TDP1-209ENST00000554180 ACSL3O95573 720 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 AGTP01019 485 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 POLBP06746 335 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 IVLP07476 585 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 HNRNPLP14866 589 aaKnown RBP eCLIP7.72□□□□□ -1.17
TDP1-209ENST00000554180 MGAT1P26572 445 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 STX2P32856 288 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 CTHP32929 405 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 TNFRSF4P43489 277 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 RECQLP46063 649 aaPredicted RBP7.72□□□□□ -1.17
TDP1-209ENST00000554180 GRIA4P48058 902 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 SESN2P58004 480 aaPredicted RBP7.72□□□□□ -1.17
TDP1-209ENST00000554180 BCL2L1Q07817 233 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 MESP2Q0VG99 397 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 TRAF2Q12933 501 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 OLIG2Q13516 323 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 SLC29A2Q14542 456 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 IHHQ14623 411 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 STAT4Q14765 748 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 PCSK7Q16549 785 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 MYLK3Q32MK0 819 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 HNRNPA1L2Q32P51 320 aaKnown RBP7.72□□□□□ -1.17
TDP1-209ENST00000554180 ACCSLQ4AC99 568 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 CARD16Q5EG05 197 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 PCID2Q5JVF3 399 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 ATXN7L2Q5T6C5 722 aaPredicted RBP7.72□□□□□ -1.17
TDP1-209ENST00000554180 CASC4Q6P4E1 433 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 NLRP9Q7RTR0 991 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 TMEM135Q86UB9 458 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 PALM2Q8IXS6 379 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 AGGF1Q8N302 714 aaeCLIP7.72□□□□□ -1.17
TDP1-209ENST00000554180 PPHLN1Q8NEY8 458 aaKnown RBP7.72□□□□□ -1.17
TDP1-209ENST00000554180 OR2A12Q8NGT7 310 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 GSDMBQ8TAX9 411 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 KCNV2Q8TDN2 545 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 CYB5D2Q8WUJ1 264 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 PPM1EQ8WY54 764 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 MYO19Q96H55 970 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 C9orf72Q96LT7 481 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 ZNF641Q96N77 438 aaPredicted RBP7.72□□□□□ -1.17
TDP1-209ENST00000554180 RUFY1Q96T51 708 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 C19orf43Q9BQ61 176 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 APOL2Q9BQE5 337 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 CCDC77Q9BR77 488 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 TMEM109Q9BVC6 243 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 KIFC1Q9BW19 673 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 OSBPL1AQ9BXW6 950 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 VPS37BQ9H9H4 285 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 LRRC4CQ9HCJ2 640 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 SLC2A4RGQ9NR83 387 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 SYBUQ9NX95 663 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 THAP10Q9P2Z0 257 aaPredicted RBP7.72□□□□□ -1.17
TDP1-209ENST00000554180 HECAQ9UBI9 543 aaPredicted RBP7.72□□□□□ -1.17
TDP1-209ENST00000554180 PRKAG3Q9UGI9 489 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 FETUBQ9UGM5 382 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 LIMD1Q9UGP4 676 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 ZC3H7BQ9UGR2 993 aaKnown RBP7.72□□□□□ -1.17
TDP1-209ENST00000554180 SLCO3A1Q9UIG8 710 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 RIMKLBQ9ULI2 386 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 SOX13Q9UN79 622 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 RAI2Q9Y5P3 530 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 MAD1L1Q9Y6D9 718 aa7.72□□□□□ -1.17
TDP1-209ENST00000554180 KIAA1549LQ6ZVL6 1849 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms