RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 RFXAPO00287 272 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 LINC01565O15544 149 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 RNF40O75150 1001 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 POP4O95707 220 aaKnown RBP10.99□□□□□ -0.65
PABPN1-203ENST00000553960 ATP5BP06576 529 aaKnown RBP10.99□□□□□ -0.65
PABPN1-203ENST00000553960 SRCP12931 536 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 GLULP15104 373 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 SSTR1P30872 391 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 CD70P32970 193 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 CD86P42081 329 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 GRIA4P48058 902 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 ARCN1P48444 511 aaKnown RBP10.99□□□□□ -0.65
PABPN1-203ENST00000553960 SUOXP51687 545 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 SNRPD1P62314 119 aaKnown RBP10.99□□□□□ -0.65
PABPN1-203ENST00000553960 DSC2Q02487 901 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 MGAT5Q09328 741 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 ADGRE1Q14246 886 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 CBX2Q14781 532 aaPredicted RBP10.99□□□□□ -0.65
PABPN1-203ENST00000553960 KRT71Q3SY84 523 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 FUT11Q495W5 492 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 LGSNQ5TDP6 509 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 PDPK2PQ6A1A2 396 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 ASTLQ6HA08 431 aaPredicted RBP10.99□□□□□ -0.65
PABPN1-203ENST00000553960 VITQ6UXI7 678 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 SH2D5Q6ZV89 423 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 TAOK1Q7L7X3 1001 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 CCDC91Q7Z6B0 441 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 SRLQ86TD4 932 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 LCA5Q86VQ0 697 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 CPA6Q8N4T0 437 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 NETO2Q8NC67 525 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 GPR150Q8NGU9 434 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 ACMSDQ8TDX5 336 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 FBF1Q8TES7 1133 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 FRS2Q8WU20 508 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 MZB1Q8WU39 189 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 LRRN4Q8WUT4 740 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 DCAKDQ8WVC6 231 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 CDKL2Q92772 493 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 CENPTQ96BT3 561 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 MSANTD3Q96H12 275 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 MYO19Q96H55 970 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 MRGPRX3Q96LB0 322 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 MYADMQ96S97 322 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 CEP41Q9BYV8 373 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 SMG9Q9H0W8 520 aaKnown RBP10.99□□□□□ -0.65
PABPN1-203ENST00000553960 CNOT10Q9H9A5 744 aaKnown RBP10.99□□□□□ -0.65
PABPN1-203ENST00000553960 NOD2Q9HC29 1040 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 HPS4Q9NQG7 708 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 DKK3Q9UBP4 350 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 CLEC4EQ9ULY5 219 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 CHMP2BQ9UQN3 213 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 COL4A3Q01955 1670 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 ANKRD66B4E2M5 251 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 RGS16O15492 202 aaPredicted RBP10.98□□□□□ -0.65
PABPN1-203ENST00000553960 LDB2O43679 373 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 SNAP91O60641 907 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 IGSF6O95976 241 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 HNRNPLP14866 589 aaKnown RBP eCLIP10.98□□□□□ -0.65
PABPN1-203ENST00000553960 PAMP19021 973 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 CD9P21926 228 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 GLDCP23378 1020 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 MGAT1P26572 445 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 CSRP3P50461 194 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 CSE1LP55060 971 aaKnown RBP10.98□□□□□ -0.65
PABPN1-203ENST00000553960 HTR4Q13639 388 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 RUNX3Q13761 415 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 GRIN2CQ14957 1233 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 TTMPQ5BVD1 217 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 SIRPB2Q5JXA9 342 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 TANGO2Q6ICL3 276 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 KDM7AQ6ZMT4 941 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 TPGS1Q6ZTW0 290 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 TRABD2AQ86V40 505 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 CBARPQ8N350 705 aaPredicted RBP10.98□□□□□ -0.65
PABPN1-203ENST00000553960 PLCD3Q8N3E9 789 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 MPP5Q8N3R9 675 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 DNAAF3Q8N9W5 541 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.98□□□□□ -0.65
PABPN1-203ENST00000553960 CALML6Q8TD86 181 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 STYXQ8WUJ0 223 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 ING5Q8WYH8 240 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 ARL8AQ96BM9 186 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 ASIC4Q96FT7 647 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 CERS2Q96G23 380 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 MCCC1Q96RQ3 725 aaPredicted RBP10.98□□□□□ -0.65
PABPN1-203ENST00000553960 CPNE1Q99829 537 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 OSBPL1AQ9BXW6 950 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 VPS37BQ9H9H4 285 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 SCUBE2Q9NQ36 999 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 SYBUQ9NX95 663 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 PSD3Q9NYI0 1048 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 NFKBIL1Q9UBC1 381 aaPredicted RBP10.98□□□□□ -0.65
PABPN1-203ENST00000553960 CD207Q9UJ71 328 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 SLC25A13Q9UJS0 675 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 CORO1CQ9ULV4 474 aaPredicted RBP10.98□□□□□ -0.65
PABPN1-203ENST00000553960 WNT6Q9Y6F9 365 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.98□□□□□ -0.65
PABPN1-203ENST00000553960 RPS6KL1Q9Y6S9 549 aa10.98□□□□□ -0.65
PABPN1-203ENST00000553960 COL4A2P08572 1712 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms