RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 DEFB119Q8N690 84 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 GPR161Q8N6U8 529 aaKnown RBP11.79□□□□□ -0.52
PSMC6-204ENST00000553798 CCNYQ8ND76 341 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 P3H4Q92791 437 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 BIRC7Q96CA5 298 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 ECHDC3Q96DC8 303 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 NSMCE3Q96MG7 304 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 KLHL32Q96NJ5 620 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 ALS2CR12Q96Q35 445 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 HERPUD2Q9BSE4 406 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 HEMGNQ9BXL5 484 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 ARRDC1-AS1Q9H2J1 176 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 SUV39H2Q9H5I1 410 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 ATP13A3Q9H7F0 1226 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 VPS45Q9NRW7 570 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 TMEM74BQ9NUR3 256 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 HAUS2Q9NVX0 235 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 SAE1Q9UBE0 346 aaPredicted RBP11.79□□□□□ -0.52
PSMC6-204ENST00000553798 SHROOM3Q8TF72 1996 aa11.79□□□□□ -0.52
PSMC6-204ENST00000553798 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.78□□□□□ -0.52
PSMC6-204ENST00000553798 HACD1B0YJ81 288 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 TRAFD1O14545 582 aaPredicted RBP11.78□□□□□ -0.52
PSMC6-204ENST00000553798 AREL1O15033 823 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 ZSCAN12O43309 604 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 MTSS1O43312 755 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 HTRA2O43464 458 aaPredicted RBP11.78□□□□□ -0.52
PSMC6-204ENST00000553798 FOXD2O60548 495 aaPredicted RBP11.78□□□□□ -0.52
PSMC6-204ENST00000553798 TIMP2P16035 220 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 SERPINA4P29622 427 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 NUDT1P36639 197 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 SCNN1BP51168 640 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 CREB5Q02930 508 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 CCDC173Q0VFZ6 552 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 NOMO1Q15155 1222 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 CSRP2Q16527 193 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 FBXL19Q6PCT2 694 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 BRAT1Q6PJG6 821 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 ARMCX6Q7L4S7 300 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 RABEPKQ7Z6M1 372 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 TRIM69Q86WT6 500 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 CAMK1DQ8IU85 385 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 DCLK2Q8N568 766 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 CNTD1Q8N815 330 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 ORAI3Q9BRQ5 295 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 NOD2Q9HC29 1040 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 NT5MQ9NPB1 228 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 PARD6AQ9NPB6 346 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 RBM22Q9NW64 420 aaKnown RBP eCLIP11.78□□□□□ -0.52
PSMC6-204ENST00000553798 ATP8A1Q9Y2Q0 1164 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 FADS3Q9Y5Q0 445 aa11.78□□□□□ -0.52
PSMC6-204ENST00000553798 TBC1D3DA0A087WVF3 549 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 TBC1D3IA0A087WXS9 549 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 TBC1D3EA0A087X179 549 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 TBC1D3KA0A087X1G2 549 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 TBC1D3FA6NER0 549 aaPredicted RBP11.77□□□□□ -0.53
PSMC6-204ENST00000553798 TBC1D3LB9A6J9 549 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 KCNK1O00180 336 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 SPINT1O43278 529 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 TSPAN6O43657 245 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 SOCS5O75159 536 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 GJB3O75712 270 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 PIGNO95427 931 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 JCHAINP01591 159 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 TBC1D3HP0C7X1 549 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 CD27P26842 260 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 BCL2L1Q07817 233 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 SPEM2Q0P670 501 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 AP1B1Q10567 949 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 ZBTB17Q13105 803 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 KLF1Q13351 362 aaPredicted RBP11.77□□□□□ -0.53
PSMC6-204ENST00000553798 ZNF211Q13398 564 aaPredicted RBP11.77□□□□□ -0.53
PSMC6-204ENST00000553798 RPS6KA1Q15418 735 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 UGP2Q16851 508 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 TBC1D3GQ6DHY5 549 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 TBC1D3CQ6IPX1 549 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 AADACL2Q6P093 401 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 ALYREFQ86V81 257 aaKnown RBP11.77□□□□□ -0.53
PSMC6-204ENST00000553798 ZSCAN30Q86W11 494 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 TBC1D3Q8IZP1 549 aaPredicted RBP11.77□□□□□ -0.53
PSMC6-204ENST00000553798 CEP76Q8TAP6 659 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 ARRDC2Q8TBH0 407 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 LRRN4Q8WUT4 740 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 TFB1MQ8WVM0 346 aaKnown RBP11.77□□□□□ -0.53
PSMC6-204ENST00000553798 PIGKQ92643 395 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 SEMA3CQ99985 751 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 TLR10Q9BXR5 811 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 POLR1EQ9GZS1 481 aaKnown RBP11.77□□□□□ -0.53
PSMC6-204ENST00000553798 CARD9Q9H257 536 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 SEMA4GQ9NTN9 838 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 SUSD2Q9UGT4 822 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 USP34Q70CQ2 3546 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 CACNA1EQ15878 2313 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 PI4KAP42356 2102 aa11.77□□□□□ -0.53
PSMC6-204ENST00000553798 DMDP11532 3685 aa11.76□□□□□ -0.53
PSMC6-204ENST00000553798 RALGAPA1Q6GYQ0 2036 aa11.76□□□□□ -0.53
PSMC6-204ENST00000553798 A0A1W2PPC4 97 aa11.76□□□□□ -0.53
PSMC6-204ENST00000553798 A0A1W2PQ67 120 aa11.76□□□□□ -0.53
PSMC6-204ENST00000553798 TTC24A2A3L6 582 aaPredicted RBP11.76□□□□□ -0.53
PSMC6-204ENST00000553798 FAM47DPA6NHR8 397 aa11.76□□□□□ -0.53
PSMC6-204ENST00000553798 MEI4A8MW99 385 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms