RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ARSJQ5FYB0 599 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-221ENST00000553498 SYCP2LQ5T4T6 812 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 ADGRF1Q5T601 910 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 TEDDM1Q5T9Z0 273 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 SAMD5Q5TGI4 173 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 KIAA0930Q6ICG6 404 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-221ENST00000553498 FIGNL1Q6PIW4 674 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 KDELC1Q6UW63 502 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 TRPM8Q7Z2W7 1104 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 NDUFAF2Q8N183 169 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 SVOPQ8N4V2 548 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 GDAP1Q8TB36 358 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 RDH11Q8TC12 318 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 GIPC2Q8TF65 315 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 CCT6BQ92526 530 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 ZNF669Q96BR6 464 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-221ENST00000553498 VWCEQ96DN2 955 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 FEM1CQ96JP0 617 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 C7orf26Q96N11 449 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 YME1L1Q96TA2 773 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 RBBP8Q99708 897 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 TUBB6Q9BUF5 446 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 C2orf49Q9BVC5 232 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-221ENST00000553498 VN1R3Q9BXE9 311 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 CCSER2Q9H7U1 834 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 MANSC1Q9H8J5 431 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 KIF9Q9HAQ2 790 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 FGFR1OP2Q9NVK5 253 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 SIRPGQ9P1W8 387 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 SEPT3Q9UH03 358 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 ZMYM5Q9UJ78 669 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 NUDT5Q9UKK9 219 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 PHTF1Q9UMS5 762 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 MAGED2Q9UNF1 606 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-221ENST00000553498 ANKRD6Q9Y2G4 727 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 TBC1D30Q9Y2I9 924 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 RWDD3Q9Y3V2 267 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 TCAF1Q9Y4C2 921 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 NR2E3Q9Y5X4 410 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 IRAK3Q9Y616 596 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 USH1CQ9Y6N9 552 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 FRMPD3Q5JV73 1810 aa7.4□□□□□ -1.23
ATXN3-221ENST00000553498 DOCK3Q8IZD9 2030 aa7.4□□□□□ -1.23
ATXN3-221ENST00000553498 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 LOC285095A0A1B0GVY8 99 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 ADAM12O43184 909 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 EFSO43281 561 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 KDELR3O43731 214 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 SOAT2O75908 522 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 SEC24AO95486 1093 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 FGF1P05230 155 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 HLA-DQB2P05538 268 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 NEFHP12036 1026 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 GRK2P25098 689 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 TYK2P29597 1187 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 FOXN2P32314 431 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 SERPINH1P50454 418 aaKnown RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 KPNA2P52292 529 aaKnown RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 WNT3AP56704 352 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 HTRA3P83110 453 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 GNA12Q03113 381 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 NSUN2Q08J23 767 aaKnown RBP eCLIP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 ZNF177Q13360 481 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 MTM1Q13496 603 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 ZNF235Q14590 738 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 LRRC26Q2I0M4 334 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 ALFQ53S48 1182 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 MPP7Q5T2T1 576 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 RNF187Q5TA31 235 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 MROH9Q5TGP6 573 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 NADSYN1Q6IA69 706 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 DENND5AQ6IQ26 1287 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 ARHGAP36Q6ZRI8 547 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 OTOP3Q7RTS5 596 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 TFAP2DQ7Z6R9 452 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 DNAJB7Q7Z6W7 309 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 STRA8Q7Z7C7 330 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 KCNMB4Q86W47 210 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 LGI2Q8N0V4 545 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 ELMOD1Q8N336 334 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 ZNF557Q8N988 423 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 IPMKQ8NFU5 416 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 PHOSPHO2Q8TCD6 241 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 GPR152Q8TDT2 470 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 CLP1Q92989 425 aaKnown RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 USP13Q92995 863 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 IGSF8Q969P0 613 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 PAWRQ96IZ0 340 aaKnown RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 TSNARE1Q96NA8 513 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 FAM111AQ96PZ2 611 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 PSKH2Q96QS6 385 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 C19orf43Q9BQ61 176 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 MCMBPQ9BTE3 642 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 FICDQ9BVA6 458 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 EMILIN2Q9BXX0 1053 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 TRIM55Q9BYV6 548 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 RHOJQ9H4E5 214 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 RABEP2Q9H5N1 569 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 PDFQ9HBH1 243 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 C20orf96Q9NUD7 363 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms