RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 BRCA1P38398 1863 aaKnown RBP5.08□□□□□ -1.6
ATXN3-217ENST00000553287 KIF13BQ9NQT8 1826 aa5.08□□□□□ -1.6
ATXN3-217ENST00000553287 CD163L1Q9NR16 1453 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 EVC2Q86UK5 1308 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 TTC21AQ8NDW8 1320 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 A0A1B0GVT2 93 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 TMEM247A6NEH6 219 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 OR6C75A6NL08 312 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 GTPBP1O00178 669 aaKnown RBP5.07□□□□□ -1.6
ATXN3-217ENST00000553287 SYN3O14994 580 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 CHRNB2P17787 502 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 AVPR2P30518 371 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 RFX5P48382 616 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-217ENST00000553287 RBM5P52756 815 aaKnown RBP eCLIP5.07□□□□□ -1.6
ATXN3-217ENST00000553287 TMPRSS3P57727 454 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 SELENOVP59797 346 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 ZXDBP98169 803 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 ROR2Q01974 943 aaKnown RBP5.07□□□□□ -1.6
ATXN3-217ENST00000553287 RRS1Q15050 365 aaKnown RBP5.07□□□□□ -1.6
ATXN3-217ENST00000553287 ZNF585BQ52M93 769 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 OR6Y1Q8NGX8 325 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 WASF1Q92558 559 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 MIB2Q96AX9 1013 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 CADM1Q9BY67 442 aaKnown RBP5.07□□□□□ -1.6
ATXN3-217ENST00000553287 ACAD9Q9H845 621 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 PLEKHB1Q9UF11 243 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-217ENST00000553287 PTGDR2Q9Y5Y4 395 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 SBF1O95248 1867 aa5.07□□□□□ -1.6
ATXN3-217ENST00000553287 MAP2P11137 1827 aaKnown RBP5.07□□□□□ -1.6
ATXN3-217ENST00000553287 TNRC6CQ9HCJ0 1690 aaKnown RBP5.06□□□□□ -1.6
ATXN3-217ENST00000553287 MAP3K19Q56UN5 1328 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 INAFM1C9JVW0 142 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 I6L893 689 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-217ENST00000553287 IPO5O00410 1097 aaKnown RBP5.06□□□□□ -1.6
ATXN3-217ENST00000553287 TMCC1O94876 653 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 HOXC6P09630 235 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 CYP4B1P13584 511 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 ACP5P13686 325 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 CST5P28325 142 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-217ENST00000553287 TNFRSF8P28908 595 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 HOXC9P31274 260 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 RPS6KA3P51812 740 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 KRTAP10-9P60411 292 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 LTBQ06643 244 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 SLC4A8Q2Y0W8 1093 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 GXYLT1Q4G148 440 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 OTUD1Q5VV17 481 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-217ENST00000553287 TMEM268Q5VZI3 342 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 JMJD6Q6NYC1 403 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-217ENST00000553287 RASGRP2Q7LDG7 609 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 CADM3Q8N126 398 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 PRR26Q8N8Z3 221 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 PIGBQ92521 554 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 GOLGA1Q92805 767 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 NEUROG1Q92886 237 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 PAGR1Q9BTK6 254 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 CATSPERBQ9H7T0 1116 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 PLEKHA2Q9HB19 425 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 SRP68Q9UHB9 627 aaKnown RBP5.06□□□□□ -1.6
ATXN3-217ENST00000553287 MYO6Q9UM54 1294 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 CCDC88AQ3V6T2 1871 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 C10orf71Q711Q0 1435 aa5.06□□□□□ -1.6
ATXN3-217ENST00000553287 ARFGEF1Q9Y6D6 1849 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 C4orf47A7E2U8 309 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 SEPT4O43236 478 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 RGS14O43566 566 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 SPRY3O43610 288 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 CCNT1O60563 726 aaKnown RBP5.05□□□□□ -1.6
ATXN3-217ENST00000553287 LCATP04180 440 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 PRKCHP24723 683 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 HOXD3P31249 432 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-217ENST00000553287 AVPR1AP37288 418 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 LBX1P52954 281 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 PMS2P54278 862 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 ZP1P60852 638 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 GPS2Q13227 327 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 PKP1Q13835 747 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 SMAD1Q15797 465 aaKnown RBP5.05□□□□□ -1.6
ATXN3-217ENST00000553287 DUSP6Q16828 381 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 FNBP1LQ5T0N5 605 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 TMEM71Q6P5X7 295 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 ZNF367Q7RTV3 350 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 HORMAD2Q8N7B1 307 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 FAR1Q8WVX9 515 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 ZNF333Q96JL9 665 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 IFT27Q9BW83 186 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 THAP1Q9NVV9 213 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 C4AP0C0L4 1744 aa5.05□□□□□ -1.6
ATXN3-217ENST00000553287 TIAM2Q8IVF5 1701 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 SAC3D1A6NKF1 404 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 HSPB6O14558 160 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 TFRCP02786 760 aaKnown RBP5.04□□□□□ -1.6
ATXN3-217ENST00000553287 ACAA1P09110 424 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-217ENST00000553287 UNGP13051 313 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-217ENST00000553287 ARSAP15289 507 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 CHKAP35790 457 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 AMPHP49418 695 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 PCYT1AP49585 367 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 PRKAA2P54646 552 aa5.04□□□□□ -1.6
ATXN3-217ENST00000553287 ABATP80404 500 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms