RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 GTF3C3Q9Y5Q9 886 aa9.51□□□□□ -0.89
CHD8-203ENST00000553283 ASH1LQ9NR48 2969 aaKnown RBP9.51□□□□□ -0.89
CHD8-203ENST00000553283 ZSCAN5CA6NGD5 496 aaPredicted RBP9.5□□□□□ -0.89
CHD8-203ENST00000553283 MUSKO15146 869 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 YY2O15391 372 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 MMP20O60882 483 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 TM7SF2O76062 418 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 GFPT2O94808 682 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 ANXA6P08133 673 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 KRT3P12035 628 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 PLA2G2AP14555 144 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 TIMP2P16035 220 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 EEF1GP26641 437 aaKnown RBP9.5□□□□□ -0.89
CHD8-203ENST00000553283 IGFALSP35858 605 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 EIF4A3P38919 411 aaKnown RBP9.5□□□□□ -0.89
CHD8-203ENST00000553283 HDAC4P56524 1084 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 SKOR1P84550 965 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 FMO1Q01740 532 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 PPARDQ03181 441 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 RAD51Q06609 339 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 VAC14Q08AM6 782 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 INO80DQ53TQ3 878 aaPredicted RBP9.5□□□□□ -0.89
CHD8-203ENST00000553283 PRRT3Q5FWE3 981 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 TCP11X2Q5H9J9 407 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 CT47A1Q5JQC4 288 aaPredicted RBP9.5□□□□□ -0.89
CHD8-203ENST00000553283 PERM1Q5SV97 790 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 C6orf132Q5T0Z8 1188 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 FAXCQ5TGI0 409 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 CRTC1Q6UUV9 634 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 TRIM72Q6ZMU5 477 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 SLC35F3Q8IY50 421 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 CCDC185Q8N715 623 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 JOSD2Q8TAC2 188 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 SLC30A5Q8TAD4 765 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 WDR48Q8TAF3 677 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 CXorf40AQ8TE69 158 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 CASKIN2Q8WXE0 1202 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 NAT6Q93015 286 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 NTAN1Q96AB6 310 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 PRR11Q96HE9 360 aaPredicted RBP9.5□□□□□ -0.89
CHD8-203ENST00000553283 GDAP1L1Q96MZ0 367 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 C11orf70Q9BRQ4 267 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 LRRC61Q9BV99 259 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 C1QTNF7Q9BXJ2 289 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 SLC13A1Q9BZW2 595 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 TTYH3Q9C0H2 523 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 GANQ9H2C0 597 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 NOL6Q9H6R4 1146 aaKnown RBP9.5□□□□□ -0.89
CHD8-203ENST00000553283 MBNL1Q9NR56 388 aaKnown RBP9.5□□□□□ -0.89
CHD8-203ENST00000553283 DKK3Q9UBP4 350 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 PNMA8BQ9ULN7 279 aaPredicted RBP9.5□□□□□ -0.89
CHD8-203ENST00000553283 PADI4Q9UM07 663 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 MFHAS1Q9Y4C4 1052 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 DOCK4Q8N1I0 1966 aa9.5□□□□□ -0.89
CHD8-203ENST00000553283 TMEM110-MUSTN1A8MSY1 372 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 TMCC1O94876 653 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 GJB6O95452 261 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 UNGP13051 313 aaPredicted RBP9.49□□□□□ -0.89
CHD8-203ENST00000553283 TSHRP16473 764 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 ITIH2P19823 946 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 RFC1P35251 1148 aaPredicted RBP9.49□□□□□ -0.89
CHD8-203ENST00000553283 SOX5P35711 763 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 MLLT3P42568 568 aaPredicted RBP9.49□□□□□ -0.89
CHD8-203ENST00000553283 PEX5P50542 639 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 SUOXP51687 545 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 PTP4A2Q12974 167 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 KLHL40Q2TBA0 621 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 TMEM52BQ4KMG9 183 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 LRRC73Q5JTD7 316 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 ESRP1Q6NXG1 681 aaKnown RBP9.49□□□□□ -0.89
CHD8-203ENST00000553283 MACC1Q6ZN28 852 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 SLFN11Q7Z7L1 901 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 ZNF354CQ86Y25 554 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 FSTL5Q8N475 847 aaPredicted RBP9.49□□□□□ -0.89
CHD8-203ENST00000553283 ARL14Q8N4G2 192 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 RTL3Q8N8U3 475 aaKnown RBP9.49□□□□□ -0.89
CHD8-203ENST00000553283 TP53I13Q8NBR0 393 aaPredicted RBP9.49□□□□□ -0.89
CHD8-203ENST00000553283 WDR36Q8NI36 951 aaKnown RBP9.49□□□□□ -0.89
CHD8-203ENST00000553283 HCAR2Q8TDS4 363 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 FAM172AQ8WUF8 416 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 CCDC97Q96F63 343 aaPredicted RBP9.49□□□□□ -0.89
CHD8-203ENST00000553283 PCDHB18PQ96TA0 734 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 EPAS1Q99814 870 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 CPEB1Q9BZB8 566 aaKnown RBP9.49□□□□□ -0.89
CHD8-203ENST00000553283 CLPBQ9H078 707 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 KLC2Q9H0B6 622 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 TAB2Q9NYJ8 693 aa9.49□□□□□ -0.89
CHD8-203ENST00000553283 COL6A6A6NMZ7 2263 aa9.48□□□□□ -0.89
CHD8-203ENST00000553283 PMS2P1A4D2B8 440 aa9.48□□□□□ -0.89
CHD8-203ENST00000553283 CDRT15L2A8MXV6 281 aa9.48□□□□□ -0.89
CHD8-203ENST00000553283 RASA4BC9J798 803 aa9.48□□□□□ -0.89
CHD8-203ENST00000553283 NTN3O00634 580 aaPredicted RBP9.48□□□□□ -0.89
CHD8-203ENST00000553283 CASC3O15234 703 aaKnown RBP9.48□□□□□ -0.89
CHD8-203ENST00000553283 RASA4O43374 803 aa9.48□□□□□ -0.89
CHD8-203ENST00000553283 TNFSF15O95150 251 aa9.48□□□□□ -0.89
CHD8-203ENST00000553283 IGSF6O95976 241 aa9.48□□□□□ -0.89
CHD8-203ENST00000553283 GPD1P21695 349 aa9.48□□□□□ -0.89
CHD8-203ENST00000553283 XPAP23025 273 aaPredicted RBP9.48□□□□□ -0.89
CHD8-203ENST00000553283 EPHB2P29323 1055 aa9.48□□□□□ -0.89
CHD8-203ENST00000553283 NSFP46459 744 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms