RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 GGA2Q9UJY4 613 aa12.82□□□□□ -0.36
CACNB3-223ENST00000552480 INTS6Q9UL03 887 aaKnown RBP12.82□□□□□ -0.36
CACNB3-223ENST00000552480 SMG5Q9UPR3 1016 aaKnown RBP12.82□□□□□ -0.36
CACNB3-223ENST00000552480 FCF1Q9Y324 198 aaKnown RBP12.82□□□□□ -0.36
CACNB3-223ENST00000552480 TRIM49D1C9J1S8 452 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 LINC01565O15544 149 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 PAPSS2O95340 614 aaPredicted RBP12.81□□□□□ -0.36
CACNB3-223ENST00000552480 PABPC1P11940 636 aaKnown RBP12.81□□□□□ -0.36
CACNB3-223ENST00000552480 CA4P22748 312 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 HLA-FP30511 346 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 CSNK1DP48730 415 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 SLC18A1P54219 525 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 AP1S1P61966 158 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 FUT11Q495W5 492 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 FAM78AQ5JUQ0 283 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 TSTD2Q5T7W7 516 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 ASTLQ6HA08 431 aaPredicted RBP12.81□□□□□ -0.36
CACNB3-223ENST00000552480 KIAA0930Q6ICG6 404 aaPredicted RBP12.81□□□□□ -0.36
CACNB3-223ENST00000552480 GET4Q7L5D6 327 aaPredicted RBP12.81□□□□□ -0.36
CACNB3-223ENST00000552480 SRLQ86TD4 932 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 RNF135Q8IUD6 432 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 MDM1Q8TC05 714 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 SMARCD2Q92925 531 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 RSPRY1Q96DX4 576 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 NSMCE3Q96MG7 304 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 ASB16Q96NS5 453 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 TDRD1Q9BXT4 1180 aaKnown RBP12.81□□□□□ -0.36
CACNB3-223ENST00000552480 TRPV4Q9HBA0 871 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 TREX1Q9NSU2 369 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 INTS9Q9NV88 658 aaKnown RBP12.81□□□□□ -0.36
CACNB3-223ENST00000552480 DUS2Q9NX74 493 aaKnown RBP12.81□□□□□ -0.36
CACNB3-223ENST00000552480 NKIRAS1Q9NYS0 192 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 DOCK6Q96HP0 2047 aa12.81□□□□□ -0.36
CACNB3-223ENST00000552480 FAM47DPA6NHR8 397 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 SRRM3A6NNA2 597 aaPredicted RBP12.8□□□□□ -0.36
CACNB3-223ENST00000552480 MT-CO1P00395 513 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 CYP17A1P05093 508 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 HOXB8P17481 243 aaPredicted RBP12.8□□□□□ -0.36
CACNB3-223ENST00000552480 KRT4P19013 534 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 GP5P40197 560 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 VIPR2P41587 438 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 MAPK8P45983 427 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 CSE1LP55060 971 aaKnown RBP12.8□□□□□ -0.36
CACNB3-223ENST00000552480 SULT2A1Q06520 285 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 DNAJC3Q13217 504 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 GALNT3Q14435 633 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 DHCR24Q15392 516 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 EML3Q32P44 896 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 HSP90AA5PQ58FG0 334 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 TEDDM1Q5T9Z0 273 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 GRTP1Q5TC63 336 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 TTC19Q6DKK2 380 aaPredicted RBP12.8□□□□□ -0.36
CACNB3-223ENST00000552480 ESRP1Q6NXG1 681 aaKnown RBP12.8□□□□□ -0.36
CACNB3-223ENST00000552480 SYCE2Q6PIF2 218 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 TIFABQ6ZNK6 161 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 KIAA0907Q7Z7F0 614 aaPredicted RBP12.8□□□□□ -0.36
CACNB3-223ENST00000552480 CNTN4Q8IWV2 1026 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 C4orf33Q8N1A6 199 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 BPIFB1Q8TDL5 484 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 ATXN2LQ8WWM7 1075 aaKnown RBP12.8□□□□□ -0.36
CACNB3-223ENST00000552480 FGF13Q92913 245 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 ZNF778Q96MU6 729 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 LRRC3BQ96PB8 259 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 APOL5Q9BWW9 433 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 IARS2Q9NSE4 1012 aaKnown RBP12.8□□□□□ -0.36
CACNB3-223ENST00000552480 IL1RAPL1Q9NZN1 696 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.8□□□□□ -0.36
CACNB3-223ENST00000552480 TXNDC16Q9P2K2 825 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 SLC17A6Q9P2U8 582 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 SLC25A13Q9UJS0 675 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 RIMKLBQ9ULI2 386 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 CHKBQ9Y259 395 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 HS3ST2Q9Y278 367 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 RAI2Q9Y5P3 530 aa12.8□□□□□ -0.36
CACNB3-223ENST00000552480 KIF26AQ9ULI4 1882 aaPredicted RBP12.79□□□□□ -0.36
CACNB3-223ENST00000552480 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.79□□□□□ -0.36
CACNB3-223ENST00000552480 CCDC78A2IDD5 438 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 MROH6A6NGR9 719 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 K7ERQ8 282 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 HOXC11O43248 304 aaPredicted RBP12.79□□□□□ -0.36
CACNB3-223ENST00000552480 SMAD6O43541 496 aaKnown RBP12.79□□□□□ -0.36
CACNB3-223ENST00000552480 TYROBPO43914 113 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 SIN3BO75182 1162 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 SPAG7O75391 227 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 NFATC1O95644 943 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 IGSF6O95976 241 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 ADH1CP00326 375 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 PRLP01236 227 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 ADH5P11766 374 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 SRCP12931 536 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 LSP1P33241 339 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 SPRP35270 261 aaPredicted RBP12.79□□□□□ -0.36
CACNB3-223ENST00000552480 CCNFP41002 786 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 ARCN1P48444 511 aaKnown RBP12.79□□□□□ -0.36
CACNB3-223ENST00000552480 SLC18A2Q05940 514 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 TRAF2Q12933 501 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 ADAM15Q13444 863 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 BMPR2Q13873 1038 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 MPP2Q14168 576 aa12.79□□□□□ -0.36
CACNB3-223ENST00000552480 ATXN7L2Q5T6C5 722 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms