RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 MAPK15Q8TD08 544 aa16.33■□□□□ 0.2
CALCOCO1-220ENST00000552282 FAM172AQ8WUF8 416 aa16.33■□□□□ 0.2
CALCOCO1-220ENST00000552282 LGMNQ99538 433 aa16.33■□□□□ 0.2
CALCOCO1-220ENST00000552282 LRRC61Q9BV99 259 aa16.33■□□□□ 0.2
CALCOCO1-220ENST00000552282 THSD1Q9NS62 852 aa16.33■□□□□ 0.2
CALCOCO1-220ENST00000552282 APOBEC3BQ9UH17 382 aaKnown RBP16.33■□□□□ 0.2
CALCOCO1-220ENST00000552282 DNAI1Q9UI46 699 aa16.33■□□□□ 0.2
CALCOCO1-220ENST00000552282 PNMA8BQ9ULN7 279 aaPredicted RBP16.33■□□□□ 0.2
CALCOCO1-220ENST00000552282 ITM2BQ9Y287 266 aa16.33■□□□□ 0.2
CALCOCO1-220ENST00000552282 FLNBO75369 2602 aaKnown RBP16.33■□□□□ 0.2
CALCOCO1-220ENST00000552282 A0A1W2PNU3 283 aaPredicted RBP16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 CAPN8A6NHC0 703 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 KRIT1O00522 736 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 EPHB6O15197 1021 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 IGSF6O95976 241 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 MPOP05164 745 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 CALB1P05937 261 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 KRT3P12035 628 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 TGM2P21980 687 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 GKP32189 559 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 RFC1P35251 1148 aaPredicted RBP16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 RPIAP49247 311 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 TMPRSS3P57727 454 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 RHDQ02161 417 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 RAD51Q06609 339 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 CCDC173Q0VFZ6 552 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 GRM3Q14832 879 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 KRT31Q15323 416 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 TMEM52BQ4KMG9 183 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 TENM4Q6N022 2769 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 RWDD4Q6NW29 188 aaKnown RBP16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 MON1BQ7L1V2 547 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 CLEC14AQ86T13 490 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 PHACTR4Q8IZ21 702 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 OR6K2Q8NGY2 324 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 GLMNQ92990 594 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 PRR11Q96HE9 360 aaPredicted RBP16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 KLHL32Q96NJ5 620 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 IL12RB2Q99665 862 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 TAB2Q9NYJ8 693 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 ENTPD2Q9Y5L3 495 aa16.32■□□□□ 0.2
CALCOCO1-220ENST00000552282 SIGLEC16A6NMB1 481 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 CDRT15L2A8MXV6 281 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 PES1O00541 588 aaKnown RBP16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 NTN3O00634 580 aaPredicted RBP16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 TM7SF2O76062 418 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 GPD1P21695 349 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 STAT1P42224 750 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 NSFP46459 744 aaKnown RBP16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 ZNF143P52747 638 aaPredicted RBP16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 THOP1P52888 689 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 PDX1P52945 283 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 POLR2FP61218 127 aaKnown RBP16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 C1QBPQ07021 282 aaKnown RBP16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 ELP6Q0PNE2 266 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 SERINC3Q13530 473 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 NR0B2Q15466 257 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 CLEC16AQ2KHT3 1053 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 PPP1R15BQ5SWA1 713 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 WDR59Q6PJI9 974 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 LVRNQ6Q4G3 990 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 RBM44Q6ZP01 1051 aaKnown RBP16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 EFL1Q7Z2Z2 1120 aaKnown RBP16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 SLFN11Q7Z7L1 901 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 SLC35F3Q8IY50 421 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 FSTL5Q8N475 847 aaPredicted RBP16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 SLC30A5Q8TAD4 765 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 SLC46A1Q96NT5 459 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 PCDHB18PQ96TA0 734 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 ABCG4Q9H172 646 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 ADAM22Q9P0K1 906 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 LHX3Q9UBR4 397 aa16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 IPO11Q9UI26 975 aaKnown RBP16.31■□□□□ 0.2
CALCOCO1-220ENST00000552282 CFAP69A5D8W1 941 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 TMEM110-MUSTN1A8MSY1 372 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 EIF3CLB5ME19 914 aaKnown RBP16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 NEMP1O14524 444 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 FGF10O15520 208 aaPredicted RBP16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 GCATO75600 419 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 MYF5P13349 255 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 EPHB2P29323 1055 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 BLKP51451 505 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 CDKN3Q16667 212 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 DEFB133Q30KQ1 61 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 EFHC2Q5JST6 749 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 ATXN7L2Q5T6C5 722 aaPredicted RBP16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 BROXQ5VW32 411 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 RBFAQ8N0V3 343 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 LMX1AQ8TE12 382 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 LIN37Q96GY3 246 aaPredicted RBP16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 EIF3CQ99613 913 aaKnown RBP16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 EPAS1Q99814 870 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 SELENOOQ9BVL4 669 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 MAGEB5Q9BZ81 275 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 CLPBQ9H078 707 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 PDFQ9HBH1 243 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 FAM207AQ9NSI2 230 aaPredicted RBP16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 DONSONQ9NYP3 566 aa16.3■□□□□ 0.2
CALCOCO1-220ENST00000552282 LRRC10BA6NIK2 292 aa16.29■□□□□ 0.2
CALCOCO1-220ENST00000552282 CCP110O43303 1012 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms