RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 A0A1B0GVL5 298 aa15.49■□□□□ 0.07
CACNB3-220ENST00000551716 AREL1O15033 823 aa15.49■□□□□ 0.07
CACNB3-220ENST00000551716 NUDT21O43809 227 aaKnown RBP15.49■□□□□ 0.07
CACNB3-220ENST00000551716 CPNE6O95741 557 aa15.49■□□□□ 0.07
CACNB3-220ENST00000551716 TNFP01375 233 aa15.49■□□□□ 0.07
CACNB3-220ENST00000551716 ABL2P42684 1182 aa15.49■□□□□ 0.07
CACNB3-220ENST00000551716 FMO5P49326 533 aa15.49■□□□□ 0.07
CACNB3-220ENST00000551716 SRP54P61011 504 aaKnown RBP15.49■□□□□ 0.07
CACNB3-220ENST00000551716 SEPT6Q14141 434 aa15.49■□□□□ 0.07
CACNB3-220ENST00000551716 ALG11Q2TAA5 492 aa15.49■□□□□ 0.07
CACNB3-220ENST00000551716 ALFQ53S48 1182 aa15.49■□□□□ 0.07
CACNB3-220ENST00000551716 BRMS1LQ5PSV4 323 aa15.49■□□□□ 0.07
CACNB3-220ENST00000551716 ENPP7Q6UWV6 458 aa15.49■□□□□ 0.07
CACNB3-220ENST00000551716 RD3Q7Z3Z2 195 aa15.49■□□□□ 0.07
CACNB3-220ENST00000551716 RYBPQ8N488 228 aaPredicted RBP15.49■□□□□ 0.07
CACNB3-220ENST00000551716 CXorf40AQ8TE69 158 aa15.49■□□□□ 0.07
CACNB3-220ENST00000551716 APOBEC4Q8WW27 367 aaKnown RBP15.49■□□□□ 0.07
CACNB3-220ENST00000551716 ASPSCR1Q9BZE9 553 aa15.49■□□□□ 0.07
CACNB3-220ENST00000551716 LRIT1Q9P2V4 623 aa15.49■□□□□ 0.07
CACNB3-220ENST00000551716 UTP20O75691 2785 aaKnown RBP15.49■□□□□ 0.07
CACNB3-220ENST00000551716 AGRPO00253 132 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 P4HA2O15460 535 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 MMP20O60882 483 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 ZMPSTE24O75844 475 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 AGFG2O95081 481 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 POP4O95707 220 aaKnown RBP15.48■□□□□ 0.07
CACNB3-220ENST00000551716 CALCAP01258 141 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 LIFP15018 202 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 SYKP43405 635 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 SUOXP51687 545 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 GEMIN4P57678 1058 aaKnown RBP15.48■□□□□ 0.07
CACNB3-220ENST00000551716 LRRC14Q15048 493 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 POLD3Q15054 466 aaPredicted RBP15.48■□□□□ 0.07
CACNB3-220ENST00000551716 FOXD4L6Q3SYB3 417 aaPredicted RBP15.48■□□□□ 0.07
CACNB3-220ENST00000551716 MAP9Q49MG5 647 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 C14orf28Q4W4Y0 310 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 LACTB2Q53H82 288 aaPredicted RBP15.48■□□□□ 0.07
CACNB3-220ENST00000551716 FHL5Q5TD97 284 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 FOXD4L3Q6VB84 417 aaPredicted RBP15.48■□□□□ 0.07
CACNB3-220ENST00000551716 RRAGAQ7L523 313 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 CACNA2D3Q8IZS8 1091 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 TP53I13Q8NBR0 393 aaPredicted RBP15.48■□□□□ 0.07
CACNB3-220ENST00000551716 FAM46DQ8NEK8 389 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 ABHD17AQ96GS6 310 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 CCDC34Q96HJ3 373 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 SLC45A3Q96JT2 553 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 RBM15Q96T37 977 aaKnown RBP eCLIP15.48■□□□□ 0.07
CACNB3-220ENST00000551716 SEMA6CQ9H3T2 930 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 ATP13A1Q9HD20 1204 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 MBNL1Q9NR56 388 aaKnown RBP15.48■□□□□ 0.07
CACNB3-220ENST00000551716 ARHGEF38Q9NXL2 777 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 CNTN6Q9UQ52 1028 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 DGKBQ9Y6T7 804 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 UNC13CQ8NB66 2214 aa15.48■□□□□ 0.07
CACNB3-220ENST00000551716 ICE1Q9Y2F5 2266 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 F9P00740 461 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 KRT5P13647 590 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 UGT1A3P35503 534 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 ETFBP38117 255 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 GGCXP38435 758 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 SNRPD1P62314 119 aaKnown RBP15.47■□□□□ 0.07
CACNB3-220ENST00000551716 MC1RQ01726 317 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 PDCLQ13371 301 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 TRA2AQ13595 282 aaKnown RBP eCLIP15.47■□□□□ 0.07
CACNB3-220ENST00000551716 NFATC4Q14934 902 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 C16orf72Q14CZ0 275 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 KLHL40Q2TBA0 621 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 EFHC2Q5JST6 749 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 TFAP2DQ7Z6R9 452 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 TAF8Q7Z7C8 310 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 ZNF683Q8IZ20 524 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 OR7D4Q8NG98 312 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 ZNF606Q8WXB4 792 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 KAT5Q92993 513 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 KIAA1143Q96AT1 154 aaPredicted RBP15.47■□□□□ 0.07
CACNB3-220ENST00000551716 DDA1Q9BW61 102 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 TKTL2Q9H0I9 626 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 KLQ9UEF7 1012 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 GGT7Q9UJ14 662 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 HPSEQ9Y251 543 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 ITM2BQ9Y287 266 aa15.47■□□□□ 0.07
CACNB3-220ENST00000551716 IGLV3-10A0A075B6K4 115 aa15.46■□□□□ 0.07
CACNB3-220ENST00000551716 KRIT1O00522 736 aa15.46■□□□□ 0.07
CACNB3-220ENST00000551716 VPS4BO75351 444 aa15.46■□□□□ 0.07
CACNB3-220ENST00000551716 LETM1O95202 739 aaPredicted RBP15.46■□□□□ 0.07
CACNB3-220ENST00000551716 GSRP00390 522 aa15.46■□□□□ 0.07
CACNB3-220ENST00000551716 CCL4P13236 92 aa15.46■□□□□ 0.07
CACNB3-220ENST00000551716 CXCR3P49682 368 aa15.46■□□□□ 0.07
CACNB3-220ENST00000551716 B4GALNT1Q00973 533 aa15.46■□□□□ 0.07
CACNB3-220ENST00000551716 RAD51Q06609 339 aa15.46■□□□□ 0.07
CACNB3-220ENST00000551716 HLTFQ14527 1009 aaKnown RBP eCLIP15.46■□□□□ 0.07
CACNB3-220ENST00000551716 MYLK3Q32MK0 819 aa15.46■□□□□ 0.07
CACNB3-220ENST00000551716 C11orf57Q6ZUT1 292 aaPredicted RBP15.46■□□□□ 0.07
CACNB3-220ENST00000551716 APOOQ9BUR5 198 aa15.46■□□□□ 0.07
CACNB3-220ENST00000551716 MPP6Q9NZW5 540 aa15.46■□□□□ 0.07
CACNB3-220ENST00000551716 VPS4AQ9UN37 437 aa15.46■□□□□ 0.07
CACNB3-220ENST00000551716 FCF1Q9Y324 198 aaKnown RBP15.46■□□□□ 0.07
CACNB3-220ENST00000551716 PRR19A6NJB7 356 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 MTSS1O43312 755 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms