RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 ZNF662Q6ZS27 426 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 BZW1Q7L1Q6 419 aaKnown RBP17.55■□□□□ 0.4
CDK4-208ENST00000551706 PEX26Q7Z412 305 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 PLD5Q8N7P1 536 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 TSEN2Q8NCE0 465 aaKnown RBP17.55■□□□□ 0.4
CDK4-208ENST00000551706 ARRDC3Q96B67 414 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 HDAC11Q96DB2 347 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 EXOC2Q96KP1 924 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 TUBGCP5Q96RT8 1024 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 PREBQ9HCU5 417 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 DTLQ9NZJ0 730 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 TRIM10Q9UDY6 481 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 EVLQ9UI08 416 aaPredicted RBP17.55■□□□□ 0.4
CDK4-208ENST00000551706 AMFRQ9UKV5 643 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.55■□□□□ 0.4
CDK4-208ENST00000551706 MSRB2Q9Y3D2 182 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 LOC400499M0QZD8 3231 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 IGSF10Q6WRI0 2623 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 ASH1LQ9NR48 2969 aaKnown RBP17.55■□□□□ 0.4
CDK4-208ENST00000551706 ABCA7Q8IZY2 2146 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 MIF4GDA9UHW6 222 aaKnown RBP17.54■□□□□ 0.4
CDK4-208ENST00000551706 HYAL3O43820 417 aaPredicted RBP17.54■□□□□ 0.4
CDK4-208ENST00000551706 PEX11BO96011 259 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 UGT2B4P06133 528 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 CETN2P41208 172 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 NR2C2P49116 596 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 CCR5P51681 352 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 SLC10A7Q0GE19 358 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 HNRNPDQ14103 355 aaKnown RBP17.54■□□□□ 0.4
CDK4-208ENST00000551706 PPP2R5EQ16537 467 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 PIP5KL1Q5T9C9 394 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 NEK5Q6P3R8 708 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 FBXL19Q6PCT2 694 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 NT5DC3Q86UY8 548 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 CCDC50Q8IVM0 306 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 HCAR2Q8TDS4 363 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 KRT35Q92764 455 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 RAB7BQ96AH8 199 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 BIRC7Q96CA5 298 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 ZNF641Q96N77 438 aaPredicted RBP17.54■□□□□ 0.4
CDK4-208ENST00000551706 HEY1Q9Y5J3 304 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 ADAMTS20P59510 1910 aa17.54■□□□□ 0.4
CDK4-208ENST00000551706 NYNRINQ9P2P1 1898 aaKnown RBP17.54■□□□□ 0.4
CDK4-208ENST00000551706 THADAQ6YHU6 1953 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 FREM2Q5SZK8 3169 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 TBC1D3DA0A087WVF3 549 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 TBC1D3IA0A087WXS9 549 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 TBC1D3EA0A087X179 549 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 TBC1D3KA0A087X1G2 549 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 A0A0U1RQJ8 604 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 TBC1D3FA6NER0 549 aaPredicted RBP17.53■□□□□ 0.4
CDK4-208ENST00000551706 TBC1D3LB9A6J9 549 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 PLK4O00444 970 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 KHNYNO15037 678 aaKnown RBP17.53■□□□□ 0.4
CDK4-208ENST00000551706 MATN3O15232 486 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 FSBPO95073 299 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 TBC1D3HP0C7X1 549 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 ADRB3P13945 408 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 TGM2P21980 687 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 GKP32189 559 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 NUDT1P36639 197 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 MMP13P45452 471 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 MARCKSL1P49006 195 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 RWDD2BP57060 319 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 AP1S1P61966 158 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 SLC10A2Q12908 348 aaPredicted RBP17.53■□□□□ 0.4
CDK4-208ENST00000551706 PDK1Q15118 436 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 DUOXA1Q1HG43 343 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 RALGPS1Q5JS13 557 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 TBC1D3GQ6DHY5 549 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 TBC1D3CQ6IPX1 549 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 SRLQ86TD4 932 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 TBC1D3Q8IZP1 549 aaPredicted RBP17.53■□□□□ 0.4
CDK4-208ENST00000551706 TEX26Q8N6G2 289 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 UBL4BQ8N7F7 174 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 DEFB124Q8NES8 71 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 SNX19Q92543 992 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 KLHL32Q96NJ5 620 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 MGME1Q9BQP7 344 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 BRD8Q9H0E9 1235 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 ATP13A3Q9H7F0 1226 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 TMEM74BQ9NUR3 256 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 DKK3Q9UBP4 350 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 AMACRQ9UHK6 382 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 KLK13Q9UKR3 277 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 EFR3BQ9Y2G0 817 aa17.53■□□□□ 0.4
CDK4-208ENST00000551706 ATXN2Q99700 1313 aaKnown RBP17.52■□□□□ 0.4
CDK4-208ENST00000551706 NUP205Q92621 2012 aa17.52■□□□□ 0.4
CDK4-208ENST00000551706 hCG_1818297A0A087WSY0 165 aa17.52■□□□□ 0.4
CDK4-208ENST00000551706 C16orf96A6NNT2 1141 aa17.52■□□□□ 0.4
CDK4-208ENST00000551706 C10orf142B7Z368 130 aa17.52■□□□□ 0.4
CDK4-208ENST00000551706 RNF103O00237 685 aa17.52■□□□□ 0.4
CDK4-208ENST00000551706 CDX4O14627 284 aaPredicted RBP17.52■□□□□ 0.4
CDK4-208ENST00000551706 PPP1R12AO14974 1030 aaPredicted RBP17.52■□□□□ 0.4
CDK4-208ENST00000551706 AP1G1O43747 822 aa17.52■□□□□ 0.4
CDK4-208ENST00000551706 CST8O60676 142 aa17.52■□□□□ 0.4
CDK4-208ENST00000551706 MAP3K6O95382 1288 aa17.52■□□□□ 0.4
CDK4-208ENST00000551706 ZIC2O95409 532 aaPredicted RBP17.52■□□□□ 0.4
CDK4-208ENST00000551706 CD27P26842 260 aa17.52■□□□□ 0.4
CDK4-208ENST00000551706 SERPINA4P29622 427 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms