RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 UNC5CO95185 931 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 CTSAP10619 480 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 NQO1P15559 274 aaKnown RBP11.61□□□□□ -0.55
RAB5C-208ENST00000551338 CR2P20023 1033 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 ARRB2P32121 409 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 AVPR1AP37288 418 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 POLD2P49005 469 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 ARSDP51689 593 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 PGGT1BP53609 377 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 KCNJ2P63252 427 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 ACVR1Q04771 509 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 ZNF177Q13360 481 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-208ENST00000551338 USP10Q14694 798 aaKnown RBP11.61□□□□□ -0.55
RAB5C-208ENST00000551338 CYTH1Q15438 398 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 TTC31Q49AM3 519 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-208ENST00000551338 TAF1BQ53T94 588 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-208ENST00000551338 ADGRF1Q5T601 910 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 ZNF470Q6ECI4 717 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 NEPROQ6NW34 567 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 Q6ZNB5 142 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 C16orf59Q7L2K0 433 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 SETD3Q86TU7 594 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-208ENST00000551338 TMC8Q8IU68 726 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 CRLF3Q8IUI8 442 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 HERC6Q8IVU3 1022 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 BBS5Q8N3I7 341 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 TMEM199Q8N511 208 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 PPP1R14CQ8TAE6 165 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 PSKH2Q96QS6 385 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 SORT1Q99523 831 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 DDX50Q9BQ39 737 aaKnown RBP11.61□□□□□ -0.55
RAB5C-208ENST00000551338 SPON2Q9BUD6 331 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 LRRC3Q9BY71 257 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 TRPC7Q9HCX4 862 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 IL23AQ9NPF7 189 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 FBXO6Q9NRD1 293 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-208ENST00000551338 TXLNGQ9NUQ3 528 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 THAP1Q9NVV9 213 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 KCNK4Q9NYG8 393 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 HEY2Q9UBP5 337 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 SEPT3Q9UH03 358 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 MAFFQ9ULX9 164 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 TRIM33Q9UPN9 1127 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 KCTD3Q9Y597 815 aa11.61□□□□□ -0.55
RAB5C-208ENST00000551338 SLC7A4O43246 635 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 FGF18O76093 207 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 HAUS5O94927 633 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 EPOP01588 193 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 CNPP09543 421 aaKnown RBP11.6□□□□□ -0.55
RAB5C-208ENST00000551338 SBK3P0C264 359 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 SLC35E2BP0CK96 405 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 T-ENOLP0DO92 83 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 RALBP11234 206 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 CPA3P15088 417 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 SERPINB3P29508 390 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 SLC1A6P48664 564 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 TAS2R39P59534 338 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 HTRA4P83105 476 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-208ENST00000551338 SMAD3P84022 425 aaKnown RBP11.6□□□□□ -0.55
RAB5C-208ENST00000551338 ARF5P84085 180 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 ZXDBP98169 803 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 CYP4F8P98187 520 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 CREMQ03060 361 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 ITGA9Q13797 1035 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 GALNT3Q14435 633 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 RFTN1Q14699 578 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-208ENST00000551338 CTC1Q2NKJ3 1217 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 ZNF789Q5FWF6 425 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 RBM20Q5T481 1227 aaKnown RBP11.6□□□□□ -0.55
RAB5C-208ENST00000551338 RNF219Q5W0B1 726 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-208ENST00000551338 FAM91A1Q658Y4 838 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 CNSTQ6PJW8 725 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 KIAA0408Q6ZU52 694 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 GALNT7Q86SF2 657 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 ITIH5Q86UX2 942 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 CEP97Q8IW35 865 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 FAM217AQ8IXS0 508 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 CENPLQ8N0S6 344 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-208ENST00000551338 ARL14EPQ8N8R7 260 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-208ENST00000551338 KCTD4Q8WVF5 259 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 IFT43Q96FT9 208 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 ELMO2Q96JJ3 720 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 CINPQ9BW66 212 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-208ENST00000551338 MFSD1Q9H3U5 465 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-208ENST00000551338 LHX3Q9UBR4 397 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 MID2Q9UJV3 735 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 DNAJC16Q9Y2G8 782 aa11.6□□□□□ -0.55
RAB5C-208ENST00000551338 NUP210Q8TEM1 1887 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-208ENST00000551338 OR51F1A6NGY5 319 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 CCL22O00626 93 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 NRG2O14511 850 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-208ENST00000551338 SCAMP3O14828 347 aaKnown RBP11.59□□□□□ -0.55
RAB5C-208ENST00000551338 SNAP91O60641 907 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 TBL1XO60907 577 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 ZMPSTE24O75844 475 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 ATP5HO75947 161 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 NDST3O95803 873 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 CD160O95971 181 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 APOA4P06727 396 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms