RNA–Protein interactions for RNA: ENST00000551206.5

USP15-217, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-217ENST00000551206 GGT7Q9UJ14 662 aa13.2□□□□□ -0.3
USP15-217ENST00000551206 DMTF1Q9Y222 760 aa13.2□□□□□ -0.3
USP15-217ENST00000551206 CACNA1EQ15878 2313 aa13.2□□□□□ -0.3
USP15-217ENST00000551206 PCDH15Q96QU1 1955 aa13.2□□□□□ -0.3
USP15-217ENST00000551206 SPAARA0A1B0GVQ0 90 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 LRRD1A4D1F6 860 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 SOWAHDA6NJG2 315 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 MUSKO15146 869 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 TSPAN6O43657 245 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 MAFKO60675 156 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 MTA2O94776 668 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 CEACAM1P13688 526 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 XPAP23025 273 aaPredicted RBP13.19□□□□□ -0.3
USP15-217ENST00000551206 SERPINB6P35237 376 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 NUDT1P36639 197 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 CLDN2P57739 230 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 SGCGQ13326 291 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 SLC14A1Q13336 389 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 RFTN1Q14699 578 aaPredicted RBP13.19□□□□□ -0.3
USP15-217ENST00000551206 CFAP58Q5T655 872 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 PIP4P1Q86T03 277 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 CCDC170Q8IYT3 715 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 ATPAF2Q8N5M1 289 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 SPC24Q8NBT2 197 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 LRRN4Q8WUT4 740 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 RAB7BQ96AH8 199 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 SLC17A9Q9BYT1 436 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 SUV39H2Q9H5I1 410 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 SEPT3Q9UH03 358 aa13.19□□□□□ -0.3
USP15-217ENST00000551206 EPN1Q9Y6I3 576 aaPredicted RBP13.19□□□□□ -0.3
USP15-217ENST00000551206 NYNRINQ9P2P1 1898 aaKnown RBP13.19□□□□□ -0.3
USP15-217ENST00000551206 AP1G1O43747 822 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 MMP20O60882 483 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 PRKCGP05129 697 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 COMTP21964 271 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 KDELR1P24390 212 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 AKT2P31751 481 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 CYLC1P35663 651 aaPredicted RBP13.18□□□□□ -0.3
USP15-217ENST00000551206 FAM193AP78312 1265 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 SEMG2Q02383 582 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 NSUN2Q08J23 767 aaKnown RBP eCLIP13.18□□□□□ -0.3
USP15-217ENST00000551206 FGL2Q14314 439 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 ZNF235Q14590 738 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 TMEM259Q4ZIN3 620 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 ODF2Q5BJF6 829 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 TMCO4Q5TGY1 634 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 NCBP2-AS2Q69YL0 99 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 KIAA1161Q6NSJ0 714 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 TMTC1Q8IUR5 882 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 NAXDQ8IW45 347 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 PQLC3Q8N755 202 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 NSMCE1Q8WV22 266 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 RNF25Q96BH1 459 aaPredicted RBP13.18□□□□□ -0.3
USP15-217ENST00000551206 KLHDC7BQ96G42 594 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 ZNF641Q96N77 438 aaPredicted RBP13.18□□□□□ -0.3
USP15-217ENST00000551206 ZNF599Q96NL3 588 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 ZNF670Q9BS34 389 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 WRAP53Q9BUR4 548 aaKnown RBP13.18□□□□□ -0.3
USP15-217ENST00000551206 MAK16Q9BXY0 300 aaKnown RBP13.18□□□□□ -0.3
USP15-217ENST00000551206 GOLPH3Q9H4A6 298 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 ATP13A3Q9H7F0 1226 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 GDF3Q9NR23 364 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 DKK3Q9UBP4 350 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 PCDHB9Q9Y5E1 797 aa13.18□□□□□ -0.3
USP15-217ENST00000551206 DOCK9Q9BZ29 2069 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 UPK3BL1B0FP48 263 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 UPK3BL2E5RIL1 263 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 AREL1O15033 823 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 RAD51BO15315 384 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 SPINT1O43278 529 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 SPOPO43791 374 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 MFSD11O43934 449 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 NDUFA10O95299 355 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 LCA5LO95447 670 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 PEX11BO96011 259 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 HNRNPA2B1P22626 353 aaKnown RBP13.17□□□□□ -0.3
USP15-217ENST00000551206 SLC1A1P43005 524 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 CSNK1DP48730 415 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 RENBPP51606 427 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 NXPH1P58417 271 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 MAXP61244 160 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 SIM1P81133 766 aaPredicted RBP13.17□□□□□ -0.3
USP15-217ENST00000551206 GBE1Q04446 702 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 BCL2L1Q07817 233 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 GRM3Q14832 879 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 SUZ12Q15022 739 aaKnown RBP13.17□□□□□ -0.3
USP15-217ENST00000551206 PAFAH1B3Q15102 231 aaKnown RBP13.17□□□□□ -0.3
USP15-217ENST00000551206 TCEAL1Q15170 157 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 ZNF423Q2M1K9 1284 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 MARC1Q5VT66 337 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 SPATS2Q86XZ4 545 aaKnown RBP13.17□□□□□ -0.3
USP15-217ENST00000551206 GATAD2AQ86YP4 633 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 PGBD5Q8N414 524 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.17□□□□□ -0.3
USP15-217ENST00000551206 TMEM145Q8NBT3 493 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 RHBDD1Q8TEB9 315 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 NSMCE3Q96MG7 304 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 RNF157Q96PX1 679 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 PSKH2Q96QS6 385 aa13.17□□□□□ -0.3
USP15-217ENST00000551206 TUBGCP5Q96RT8 1024 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms