RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 CYP1A2P05177 515 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 ITGAVP06756 1048 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 AKT2P31751 481 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 HNRNPH3P31942 346 aaKnown RBP13.19□□□□□ -0.3
NPAS3-209ENST00000551008 PCK1P35558 622 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 IGFALSP35858 605 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 RHOAP61586 193 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 CAMK2BQ13554 666 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 FZD2Q14332 565 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 DPYSL2Q16555 572 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 SMTNL2Q2TAL5 461 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 PROX2Q3B8N5 592 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 PPP6R3Q5H9R7 873 aaPredicted RBP13.19□□□□□ -0.3
NPAS3-209ENST00000551008 DHRS13Q6UX07 377 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 ZNF354CQ86Y25 554 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 PSTKQ8IV42 348 aaKnown RBP13.19□□□□□ -0.3
NPAS3-209ENST00000551008 OXR1Q8N573 874 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 NIPA2Q8N8Q9 360 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 TSEN2Q8NCE0 465 aaKnown RBP13.19□□□□□ -0.3
NPAS3-209ENST00000551008 RAB7BQ96AH8 199 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 EIF3CQ99613 913 aaKnown RBP13.19□□□□□ -0.3
NPAS3-209ENST00000551008 OSBPL1AQ9BXW6 950 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 CPEB1Q9BZB8 566 aaKnown RBP13.19□□□□□ -0.3
NPAS3-209ENST00000551008 KLHL11Q9NVR0 708 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 DKK3Q9UBP4 350 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 UBA2Q9UBT2 640 aaPredicted RBP13.19□□□□□ -0.3
NPAS3-209ENST00000551008 KLF15Q9UIH9 416 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 FAM208BQ5VWN6 2430 aa13.19□□□□□ -0.3
NPAS3-209ENST00000551008 LAMA5O15230 3695 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 LY6G6EA0A0G2JKS1 128 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 A6NNZ2 444 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 TSPAN6O43657 245 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 RNF8O76064 485 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 RARAP10276 462 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 AMPD1P23109 780 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 DGKAP23743 735 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 CASP14P31944 242 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 HCAR3P49019 387 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 ARRB1P49407 418 aaPredicted RBP13.18□□□□□ -0.3
NPAS3-209ENST00000551008 PFN3P60673 137 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 CCDC15Q0P6D6 951 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 SMAD1Q15797 465 aaKnown RBP13.18□□□□□ -0.3
NPAS3-209ENST00000551008 ASTE1Q2TB18 679 aaPredicted RBP13.18□□□□□ -0.3
NPAS3-209ENST00000551008 ZNF542PQ5EBM4 170 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 Q6ZSR6 202 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 POLNQ7Z5Q5 900 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 ASB12Q8WXK4 309 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 ZCCHC14Q8WYQ9 949 aaKnown RBP13.18□□□□□ -0.3
NPAS3-209ENST00000551008 CENPTQ96BT3 561 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 TRIM11Q96F44 468 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 FEM1CQ96JP0 617 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 CNDP2Q96KP4 475 aaKnown RBP13.18□□□□□ -0.3
NPAS3-209ENST00000551008 LENG8Q96PV6 779 aaPredicted RBP13.18□□□□□ -0.3
NPAS3-209ENST00000551008 CALN1Q9BXU9 219 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 PACSIN1Q9BY11 444 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 HS3ST3A1Q9Y663 406 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 U3KQA8 63 aa13.18□□□□□ -0.3
NPAS3-209ENST00000551008 ITPR1Q14643 2758 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 FAM149AA5PLN7 773 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 TMEM8BA6NDV4 472 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 GOLGA6L19H0YKK7 550 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 MAGEC1O60732 1142 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 PIAS2O75928 621 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 LDOC1O95751 146 aaPredicted RBP13.17□□□□□ -0.3
NPAS3-209ENST00000551008 IL4RP24394 825 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 ARSEP51690 589 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 TPM4P67936 248 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 ACAP1Q15027 740 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 INAVAQ3KP66 663 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 ALKBH5Q6P6C2 394 aaKnown RBP13.17□□□□□ -0.3
NPAS3-209ENST00000551008 NYAP1Q6ZVC0 841 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 PTAR1Q7Z6K3 402 aaPredicted RBP13.17□□□□□ -0.3
NPAS3-209ENST00000551008 PGBD5Q8N414 524 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 TP53I13Q8NBR0 393 aaPredicted RBP13.17□□□□□ -0.3
NPAS3-209ENST00000551008 DENND6BQ8NEG7 585 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 FAM71BQ8TC56 605 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 ECHDC3Q96DC8 303 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 CSPG4P5Q96PW8 444 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.17□□□□□ -0.3
NPAS3-209ENST00000551008 NUP85Q9BW27 656 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 PCDH18Q9HCL0 1135 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 MRPL47Q9HD33 250 aaKnown RBP13.17□□□□□ -0.3
NPAS3-209ENST00000551008 MBNL1Q9NR56 388 aaKnown RBP13.17□□□□□ -0.3
NPAS3-209ENST00000551008 ANAPC7Q9UJX3 599 aa13.17□□□□□ -0.3
NPAS3-209ENST00000551008 LUC7L2Q9Y383 392 aaKnown RBP13.17□□□□□ -0.3
NPAS3-209ENST00000551008 BZW2Q9Y6E2 419 aaKnown RBP13.17□□□□□ -0.3
NPAS3-209ENST00000551008 KIF26BQ2KJY2 2108 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 ARHGEF17Q96PE2 2063 aaPredicted RBP13.16□□□□□ -0.3
NPAS3-209ENST00000551008 ADAMTS20P59510 1910 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 SPTY2D1-AS1A0A0U1RR47 76 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 ARHGAP42A6NI28 874 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 SRRM3A6NNA2 597 aaPredicted RBP13.16□□□□□ -0.3
NPAS3-209ENST00000551008 SIGLEC6O43699 453 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 MMP20O60882 483 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 PRKCGP05129 697 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 CD48P09326 243 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 GM2AP17900 193 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 CR2P20023 1033 aa13.16□□□□□ -0.3
NPAS3-209ENST00000551008 EIF4A3P38919 411 aaKnown RBP13.16□□□□□ -0.3
NPAS3-209ENST00000551008 CSNK1DP48730 415 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms