RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 ADAM10O14672 748 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 PER2O15055 1255 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 TMPRSS11DO60235 418 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 PRAMEF2O60811 474 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 MOSPD3O75425 235 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 SLU7O95391 586 aaKnown RBP4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 GGPS1O95749 300 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 MBPP02686 304 aaPredicted RBP4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 SELLP14151 372 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 ARSAP15289 507 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 STMN1P16949 149 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 CYP3A7P24462 503 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 CIITAP33076 1130 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 TTKP33981 857 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 HNF4AP41235 474 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 NRIP1P48552 1158 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 ALDH3A2P51648 485 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 GPC5P78333 572 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 UBXN1Q04323 297 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 CDK18Q07002 472 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 DDR1Q08345 913 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 BFSP2Q13515 415 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 CBFBQ13951 182 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 ZNF268Q14587 947 aaPredicted RBP4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 C9orf152Q5JTZ5 239 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 KRT80Q6KB66 452 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 TATDN1Q6P1N9 297 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 MTFR2Q6P444 385 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 TMEM81Q6P7N7 255 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 TMEM65Q6PI78 240 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 RAPH1Q70E73 1250 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 ERC1Q8IUD2 1116 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 ARHGAP12Q8IWW6 846 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 UNC45BQ8IWX7 931 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 PLD5Q8N7P1 536 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 SYT2Q8N9I0 419 aaPredicted RBP4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 GSDMBQ8TAX9 411 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 CLEC4CQ8WTT0 213 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 DEPDC1BQ8WUY9 529 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 RAB40AQ8WXH6 277 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 CCDC47Q96A33 483 aaKnown RBP4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 RMDN1Q96DB5 314 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 TBC1D31Q96DN5 1066 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 TRMT61AQ96FX7 289 aaKnown RBP4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 CCDC34Q96HJ3 373 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 KLHL15Q96M94 604 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 GCNAQ96QF7 691 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 FIZ1Q96SL8 496 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 KLHL4Q9C0H6 718 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 EPHX3Q9H6B9 360 aa4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.83□□□□□ -1.641e-6■■■■□ 24.6
RAB3IP-214ENST00000550847 GAR1Q9NY12 217 aaKnown RBP4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 COPG1Q9Y678 874 aaKnown RBP4.83□□□□□ -1.64
RAB3IP-214ENST00000550847 ZNF521Q96K83 1311 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 CCDC187A0A096LP49 1063 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 A0A1W2PQF6 199 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 NPIPB13A6NJU9 1138 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 NPIPB5A8MRT5 1133 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 NPIPB4C9JG80 1138 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 TAF4O00268 1085 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 PSMA7O14818 248 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 HNRNPCL1O60812 293 aaKnown RBP4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 PAGE4O60829 102 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 MYBL1P10243 752 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 PEPDP12955 493 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 LYL1P12980 280 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 ZNF8P17098 575 aaPredicted RBP4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 HOXD9P28356 352 aaPredicted RBP4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 AVPR2P30518 371 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 GP5P40197 560 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 MTNR1AP48039 350 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 MRPL12P52815 198 aaKnown RBP4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 RRP1P56182 461 aaKnown RBP4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 HDAC4P56524 1084 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 ARHGAP8P85298 464 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 SLC14A1Q13336 389 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 KCNB1Q14721 858 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 E2F5Q15329 346 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 KRTCAP3Q53RY4 240 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 ZNF628Q5EBL2 1059 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 LCE1AQ5T7P2 110 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 WDR93Q6P2C0 686 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 ACSM6Q6P461 480 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 CHST3Q7LGC8 479 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 PLPPR4Q7Z2D5 763 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 SDCCAG8Q86SQ7 713 aaPredicted RBP4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 GLRX5Q86SX6 157 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 TICAM1Q8IUC6 712 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 LMNTD2Q8IXW0 634 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 CCDC170Q8IYT3 715 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 TEX9Q8N6V9 391 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 PNPLA1Q8N8W4 532 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 MAP4K1Q92918 833 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 SMARCE1Q969G3 411 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 CCDC17Q96LX7 622 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 WDFY2Q96P53 400 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 PI4K2AQ9BTU6 479 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 ELOVL5Q9NYP7 299 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 EPS15L1Q9UBC2 864 aa4.82□□□□□ -1.64
RAB3IP-214ENST00000550847 ANAPC5Q9UJX4 755 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms