RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 KLHL8Q9P2G9 620 aaPredicted RBP13.18□□□□□ -0.3
RAB5C-206ENST00000550406 TRHDEQ9UKU6 1024 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 CYP8B1Q9UNU6 501 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 ZNF148Q9UQR1 794 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 TTLL3Q9Y4R7 772 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 MYLKQ15746 1914 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 IGHV1OR15-9A0A0B4J2B8 117 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.17□□□□□ -0.3
RAB5C-206ENST00000550406 C16orf96A6NNT2 1141 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 C10orf142B7Z368 130 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 C1QTNF3-AMACRE9PGA6 284 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 F5H423 210 aaPredicted RBP13.17□□□□□ -0.3
RAB5C-206ENST00000550406 KIF2AO00139 706 aaPredicted RBP13.17□□□□□ -0.3
RAB5C-206ENST00000550406 SPINT1O43278 529 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 HRO43593 1189 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 FZD6O60353 706 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 PHF2O75151 1096 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 METTL18O95568 372 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 MT-CYBP00156 380 aaPredicted RBP13.17□□□□□ -0.3
RAB5C-206ENST00000550406 PDHA1P08559 390 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 ZSCAN5DPP0CG00 497 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 BCKDHBP21953 392 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 CES1P23141 567 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 ITGB7P26010 798 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 STIP1P31948 543 aaKnown RBP13.17□□□□□ -0.3
RAB5C-206ENST00000550406 P2RY2P41231 377 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 SRSF5Q13243 272 aaKnown RBP13.17□□□□□ -0.3
RAB5C-206ENST00000550406 GRM3Q14832 879 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 AGBL4Q5VU57 503 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 FAM46CQ5VWP2 391 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 KDELC1Q6UW63 502 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.17□□□□□ -0.3
RAB5C-206ENST00000550406 USP30Q70CQ3 517 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 PARS2Q7L3T8 475 aaKnown RBP13.17□□□□□ -0.3
RAB5C-206ENST00000550406 KLHDC8BQ8IXV7 354 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 ZBTB44Q8NCP5 570 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 ZNF592Q92610 1267 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 OXNAD1Q96HP4 312 aaPredicted RBP13.17□□□□□ -0.3
RAB5C-206ENST00000550406 ZNF641Q96N77 438 aaPredicted RBP13.17□□□□□ -0.3
RAB5C-206ENST00000550406 MLPHQ9BV36 600 aaPredicted RBP13.17□□□□□ -0.3
RAB5C-206ENST00000550406 OSBPL1AQ9BXW6 950 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 HDAC8Q9BY41 377 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 GBA3Q9H227 469 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 ATP13A3Q9H7F0 1226 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 HOMER3Q9NSC5 361 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 FBXL12Q9NXK8 326 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 WSB2Q9NYS7 404 aaPredicted RBP13.17□□□□□ -0.3
RAB5C-206ENST00000550406 UBP1Q9NZI7 540 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 DKK3Q9UBP4 350 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 RNF14Q9UBS8 474 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 CDC23Q9UJX2 597 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 SCML1Q9UN30 329 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 NEU2Q9Y3R4 380 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 RAI2Q9Y5P3 530 aa13.17□□□□□ -0.3
RAB5C-206ENST00000550406 SPAG17Q6Q759 2223 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 H0Y858 1186 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 ZNF500O60304 480 aaPredicted RBP13.16□□□□□ -0.3
RAB5C-206ENST00000550406 LILRB5O75023 590 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 NEBLO76041 1014 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 URI1O94763 535 aaPredicted RBP13.16□□□□□ -0.3
RAB5C-206ENST00000550406 ACADMP11310 421 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 PSMB4P28070 264 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 ACSL1P33121 698 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 RPL22P35268 128 aaKnown RBP13.16□□□□□ -0.3
RAB5C-206ENST00000550406 ABL2P42684 1182 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 PTGIRP43119 386 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 MAPK8P45983 427 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 BCL2L1Q07817 233 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 PTPRRQ15256 657 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 CCDC137Q6PK04 289 aaKnown RBP13.16□□□□□ -0.3
RAB5C-206ENST00000550406 ERN2Q76MJ5 926 aaKnown RBP13.16□□□□□ -0.3
RAB5C-206ENST00000550406 FAM124AQ86V42 546 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 ATL2Q8NHH9 583 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 HCAR2Q8TDS4 363 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 PIH1D2Q8WWB5 315 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 MRGPRX2Q96LB1 330 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 SMIM14Q96QK8 99 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 TRIB3Q96RU7 358 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 OMDQ99983 421 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 FAM126AQ9BYI3 521 aaPredicted RBP13.16□□□□□ -0.3
RAB5C-206ENST00000550406 DDX47Q9H0S4 455 aaKnown RBP13.16□□□□□ -0.3
RAB5C-206ENST00000550406 ZSCAN32Q9NX65 697 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 RSPH14Q9UHP6 348 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 CHKBQ9Y259 395 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 TRPM6Q9BX84 2022 aa13.16□□□□□ -0.3
RAB5C-206ENST00000550406 PLXNA2O75051 1894 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 OPHN1O60890 802 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 SOCS5O75159 536 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 ZNF217O75362 1048 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 RNASEH2AO75792 299 aaKnown RBP13.15□□□□□ -0.3
RAB5C-206ENST00000550406 PGLSO95336 258 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 IFNB1P01574 187 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 PRKCGP05129 697 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 SERPINF2P08697 491 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 ADRB3P13945 408 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 SERPINA4P29622 427 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 PAFAH1B1P43034 410 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 OLIG2Q13516 323 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 SLC14A2Q15849 920 aa13.15□□□□□ -0.3
RAB5C-206ENST00000550406 P3H1Q32P28 736 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms