RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 TMPRSS4Q9NRS4 437 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 UCKL1Q9NWZ5 548 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 NCKIPSDQ9NZQ3 722 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 FADS3Q9Y5Q0 445 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 FHOD1Q9Y613 1164 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 ARID1BQ8NFD5 2236 aaPredicted RBP7.76□□□□□ -1.17
NEK3-201ENST00000550331 PIEZO2Q9H5I5 2752 aa7.76□□□□□ -1.17
NEK3-201ENST00000550331 SPTY2D1-AS1A0A0U1RR47 76 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 B8ZZF3 427 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 F8VZ95 297 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 GOLGA8SH3BPF8 625 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 FPGTO14772 594 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 SCAMP1O15126 338 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 OIP5O43482 229 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 TSPAN6O43657 245 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 OPA1O60313 960 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 CSF2P04141 144 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 NME1P15531 152 aaKnown RBP7.75□□□□□ -1.17
NEK3-201ENST00000550331 RHOQP17081 205 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 MAPKAPK2P49137 400 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 DUSP3P51452 185 aaPredicted RBP7.75□□□□□ -1.17
NEK3-201ENST00000550331 NOMO3P69849 1222 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 RHDQ02161 417 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 FGL2Q14314 439 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 FZD2Q14332 565 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 DPCR1Q3MIW9 517 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 ARL13BQ3SXY8 428 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 MANEALQ5VSG8 457 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 ZCCHC8Q6NZY4 707 aaKnown RBP7.75□□□□□ -1.17
NEK3-201ENST00000550331 FOXR1Q6PIV2 292 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 KDM7AQ6ZMT4 941 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 PARS2Q7L3T8 475 aaKnown RBP7.75□□□□□ -1.17
NEK3-201ENST00000550331 PTAR1Q7Z6K3 402 aaPredicted RBP7.75□□□□□ -1.17
NEK3-201ENST00000550331 FAM131BQ86XD5 332 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 ZNF677Q86XU0 584 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 LSMEM2Q8N112 164 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 ZNF248Q8NDW4 579 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 DENND6BQ8NEG7 585 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 ZNF548Q8NEK5 533 aaPredicted RBP7.75□□□□□ -1.17
NEK3-201ENST00000550331 GRAMD1AQ96CP6 724 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 ARHGEF26Q96DR7 871 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 WBP1Q96G27 269 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 NAF1Q96HR8 494 aaKnown RBP7.75□□□□□ -1.17
NEK3-201ENST00000550331 APOLD1Q96LR9 279 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 CFAP57Q96MR6 1250 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 ZNF578Q96N58 590 aaPredicted RBP7.75□□□□□ -1.17
NEK3-201ENST00000550331 LENG8Q96PV6 779 aaPredicted RBP7.75□□□□□ -1.17
NEK3-201ENST00000550331 LGMNQ99538 433 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 C1QTNF2Q9BXJ5 285 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 OSBPL1AQ9BXW6 950 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 STK33Q9BYT3 514 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 CLSTN2Q9H4D0 955 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 CUEDC1Q9NWM3 386 aaPredicted RBP7.75□□□□□ -1.17
NEK3-201ENST00000550331 DNAJC28Q9NX36 388 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 HECAQ9UBI9 543 aaPredicted RBP7.75□□□□□ -1.17
NEK3-201ENST00000550331 CSNK1G3Q9Y6M4 447 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 DOPEY2Q9Y3R5 2298 aa7.75□□□□□ -1.17
NEK3-201ENST00000550331 LY6G6EA0A0G2JKS1 128 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 POM121BA6NF01 834 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 K7ESM1 405 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 TPP1O14773 563 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 RAD51BO15315 384 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 SLC28A2O43868 658 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 WISP1O95388 367 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 CD160O95971 181 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 PAK4O96013 591 aaPredicted RBP7.74□□□□□ -1.17
NEK3-201ENST00000550331 GSRP00390 522 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 CYP1A1P04798 512 aaPredicted RBP7.74□□□□□ -1.17
NEK3-201ENST00000550331 MMEP08473 750 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 MMP8P22894 467 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 EEF1GP26641 437 aaKnown RBP7.74□□□□□ -1.17
NEK3-201ENST00000550331 SDC4P31431 198 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 ADRA1BP35368 520 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 ACVRL1P37023 503 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 PTPN9P43378 593 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 LSSP48449 732 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 DNA2P51530 1060 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 PCBP4P57723 403 aaKnown RBP7.74□□□□□ -1.17
NEK3-201ENST00000550331 TMPRSS3P57727 454 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 ERVPABLB-1P60509 514 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 PFN3P60673 137 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 ATP11AP98196 1134 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 SGCGQ13326 291 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 LY6DQ14210 128 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 POLD3Q15054 466 aaPredicted RBP7.74□□□□□ -1.17
NEK3-201ENST00000550331 C2CD6Q53TS8 623 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 ZNF805Q5CZA5 627 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 TCP11X2Q5H9J9 407 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 CT47A1Q5JQC4 288 aaPredicted RBP7.74□□□□□ -1.17
NEK3-201ENST00000550331 ARHGAP40Q5TG30 622 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 BROXQ5VW32 411 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 NAA35Q5VZE5 725 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 IGF2-ASQ6U949 168 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 VASH1Q7L8A9 365 aaPredicted RBP7.74□□□□□ -1.17
NEK3-201ENST00000550331 TMC6Q7Z403 805 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 NLRP14Q86W24 1093 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 DRC7Q8IY82 874 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 EMC1Q8N766 993 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 OR2AP1Q8NGE2 309 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 RNF217Q8TC41 542 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms