RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 RSL1D1O76021 490 aaKnown RBP12.22□□□□□ -0.45
VDR-208ENST00000550325 ALDH1A2O94788 518 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 ATG7O95352 703 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 PRKCBP05771 671 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 GJB1P08034 283 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 CHRM3P20309 590 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 PTPN9P43378 593 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 CNTN2Q02246 1040 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 CLCQ05315 142 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 VPS26BQ4G0F5 336 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 JADE1Q6IE81 842 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 STYK1Q6J9G0 422 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 SIX5Q8N196 739 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 ABHD11Q8NFV4 315 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 DNAJB14Q8TBM8 379 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 CLEC4CQ8WTT0 213 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 GLMNQ92990 594 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 ITPKCQ96DU7 683 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 RTP4Q96DX8 246 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 ALPK1Q96QP1 1244 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 CEP44Q9C0F1 390 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 PORCNQ9H237 461 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 HMG20AQ9NP66 347 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 WDR70Q9NW82 654 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 SLCO1B7G3V0H7 640 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 AURKAO14965 403 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 OGTO15294 1046 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 DLGAP3O95886 979 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 NFICP08651 508 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 IL7RP16871 459 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 CSHL1Q14406 222 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 ZNF280DQ6N043 979 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 ADCK1Q86TW2 530 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 ZNF354CQ86Y25 554 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 EPHX4Q8IUS5 362 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 CMTR2Q8IYT2 770 aaKnown RBP12.22□□□□□ -0.45
VDR-208ENST00000550325 AFAP1L2Q8N4X5 818 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 CCDC185Q8N715 623 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 SNX19Q92543 992 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 ELMO2Q96JJ3 720 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 CSPG4P5Q96PW8 444 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 LHPPQ9H008 270 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 RPF1Q9H9Y2 349 aaKnown RBP12.22□□□□□ -0.45
VDR-208ENST00000550325 ABCB10Q9NRK6 738 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 RNF146Q9NTX7 359 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 SMPD3Q9NY59 655 aaPredicted RBP12.22□□□□□ -0.45
VDR-208ENST00000550325 PSME2Q9UL46 239 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 ADAMTSL1Q8N6G6 1762 aa12.22□□□□□ -0.45
VDR-208ENST00000550325 H0YJX3 145 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 ANGPT2O15123 496 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 TIMM44O43615 452 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 CES1P23141 567 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 SEPHS1P49903 392 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 AMHR2Q16671 573 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 SPANXN3Q5MJ09 141 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 C4orf22Q6V702 233 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 ACOT1Q86TX2 421 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 NLGN1Q8N2Q7 840 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 RYBPQ8N488 228 aaPredicted RBP12.21□□□□□ -0.45
VDR-208ENST00000550325 PSMA8Q8TAA3 256 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 USP33Q8TEY7 942 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 DHRS1Q96LJ7 313 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 MUS81Q96NY9 551 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 LPIN3Q9BQK8 851 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 TRIM15Q9C019 465 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 MIR1-1HGQ9H1L0 117 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 GBA3Q9H227 469 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 TBC1D13Q9NVG8 400 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 ACOT9Q9Y305 439 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 CABYRO75952 493 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 ENDOD1O94919 500 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 CAPGP40121 348 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 RPS9P46781 194 aaKnown RBP12.21□□□□□ -0.45
VDR-208ENST00000550325 AP3M2P53677 418 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 IL1RL1Q01638 556 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 ZNF846Q147U1 533 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 SPCS2Q15005 226 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 HERC3Q15034 1050 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 PHKG1Q16816 387 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 FAM83EQ2M2I3 478 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 STEAP4Q687X5 459 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 IQSEC1Q6DN90 963 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 PMF1Q6P1K2 205 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 CNSTQ6PJW8 725 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 CPSF7Q8N684 471 aaKnown RBP12.21□□□□□ -0.45
VDR-208ENST00000550325 PCYOX1LQ8NBM8 494 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 RNF145Q96MT1 663 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 QKIQ96PU8 341 aaKnown RBP eCLIP12.21□□□□□ -0.45
VDR-208ENST00000550325 KCTD15Q96SI1 283 aaPredicted RBP12.21□□□□□ -0.45
VDR-208ENST00000550325 RIC8BQ9NVN3 520 aa12.21□□□□□ -0.45
VDR-208ENST00000550325 PTBP2Q9UKA9 531 aaKnown RBP12.21□□□□□ -0.45
VDR-208ENST00000550325 TCRBV3S1A0A5B6 114 aa12.21□□□□□ -0.46
VDR-208ENST00000550325 B4GALT5O43286 388 aa12.21□□□□□ -0.46
VDR-208ENST00000550325 ADORA2BP29275 332 aa12.21□□□□□ -0.46
VDR-208ENST00000550325 PLIN5Q00G26 463 aa12.21□□□□□ -0.46
VDR-208ENST00000550325 FPGSQ05932 587 aa12.21□□□□□ -0.46
VDR-208ENST00000550325 RFTN1Q14699 578 aaPredicted RBP12.21□□□□□ -0.46
VDR-208ENST00000550325 MAPRE1Q15691 268 aaKnown RBP12.21□□□□□ -0.46
VDR-208ENST00000550325 C6orf10Q5SRN2 563 aa12.21□□□□□ -0.46
VDR-208ENST00000550325 MAP1SQ66K74 1059 aaPredicted RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms