RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 MROH8Q9H579 483 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 CXorf21Q9HAI6 301 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 USP29Q9HBJ7 922 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 GBA2Q9HCG7 927 aaPredicted RBP10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 ZNF214Q9UL59 606 aaPredicted RBP10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 MFHAS1Q9Y4C4 1052 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 PKD1L3Q7Z443 1732 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 SORBS2O94875 1100 aaKnown RBP10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 ADORA2AP29274 412 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 CD86P42081 329 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 ETV4P43268 484 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 CCR10P46092 362 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 TIGD2Q4W5G0 525 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 FBXO48Q5FWF7 155 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 LDLRAP1Q5SW96 308 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 OR52E8Q6IFG1 317 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 ESRP1Q6NXG1 681 aaKnown RBP10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 TRIM74Q86UV6 250 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 TRIM73Q86UV7 250 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 C8orf59Q8N0T1 100 aaPredicted RBP10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 AHI1Q8N157 1196 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 MAGED4Q96JG8 741 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 SEPT5Q99719 369 aaPredicted RBP10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 ROGDIQ9GZN7 287 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 PDZD7Q9H5P4 517 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 PRDM16Q9HAZ2 1276 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 TAS2R13Q9NYV9 303 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 CYTH4Q9UIA0 394 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 C2orf81A6NN90 581 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 SNAP91O60641 907 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 CBFA2T3O75081 653 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 IPO13O94829 963 aaKnown RBP10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 GUCA1CO95843 209 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 ALDOAP04075 364 aaKnown RBP10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 ASLP04424 464 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 FGFR1P11362 822 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 PTPN3P26045 913 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 FMO4P31512 558 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 RABGGTBP53611 331 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 TAS2R39P59534 338 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 CCDC85BQ15834 202 aaPredicted RBP10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 DPYSL2Q16555 572 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 SOWAHAQ2M3V2 549 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 MGAT5BQ3V5L5 792 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 PKN3Q6P5Z2 889 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 SPESP1Q6UW49 350 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 PLD6Q8N2A8 252 aaKnown RBP10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 ATG16L2Q8NAA4 619 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 BHMTQ93088 406 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 HDAC10Q969S8 669 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 FAM120BQ96EK7 910 aaKnown RBP10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 SLC39A3Q9BRY0 314 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 HGH1Q9BTY7 390 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 KCNK13Q9HB14 408 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 ATAD3AQ9NVI7 634 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 LRFN2Q9ULH4 789 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 SNX10Q9Y5X0 201 aa10.3□□□□□ -0.76
SMARCC2-209ENST00000550164 CCL22O00626 93 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 RGS5O15539 181 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 ZBTB48P10074 688 aaPredicted RBP10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 NDUFV1P49821 464 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 CCT8P50990 548 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 CLCN5P51795 746 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 CCNIQ14094 377 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 CACHD1Q5VU97 1274 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 BROXQ5VW32 411 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 REP15Q6BDI9 236 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 UTS2BQ765I0 119 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 CLYBLQ8N0X4 340 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 GATA6Q92908 595 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 HSPBAP1Q96EW2 488 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 SMARCD1Q96GM5 515 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 MUC3BQ9H195 1237 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 RAD21L1Q9H4I0 556 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 MINDY3Q9H8M7 445 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 ZFYVE28Q9HCC9 887 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 HMG20AQ9NP66 347 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 TMPRSS4Q9NRS4 437 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 POLG2Q9UHN1 485 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 PCDHGB4Q9UN71 923 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 VWA7Q9Y334 891 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 SH3GLB1Q9Y371 365 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 ADAMTSL3P82987 1691 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 H3BNX3 289 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 AZIN1O14977 448 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 POMCP01189 267 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 ITGB6P18564 788 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 DEFA1P59665 94 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 DEFA3P59666 94 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 MBTD1Q05BQ5 628 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 DDX39BQ13838 428 aaKnown RBP10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 PAOXQ6QHF9 649 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 SAPCD2Q86UD0 394 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 ZNF410Q86VK4 478 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 LZTR1Q8N653 840 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 KLHL23Q8NBE8 558 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 BORCS5Q969J3 196 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 ERLEC1Q96DZ1 483 aa10.29□□□□□ -0.76
SMARCC2-209ENST00000550164 GAD1Q99259 594 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms