RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 CCT7Q99832 543 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 CNTN3Q9P232 1028 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 ANKRD6Q9Y2G4 727 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 ADAMTS7Q9UKP4 1686 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 KPNA3O00505 521 aaPredicted RBP15.13■□□□□ 0.01
CUX1-214ENST00000550008 CKBP12277 381 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 MLNP12872 115 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 ME2P23368 584 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 EEF1DP29692 281 aaKnown RBP15.13■□□□□ 0.01
CUX1-214ENST00000550008 CCNG1P51959 295 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 USP41Q3LFD5 358 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 ZNF786Q8N393 782 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 HBEGFQ99075 208 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 MLPHQ9BV36 600 aaPredicted RBP15.13■□□□□ 0.01
CUX1-214ENST00000550008 SLC13A4Q9UKG4 626 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 CROTQ9UKG9 612 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 GABRQQ9UN88 632 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 TNRC6CQ9HCJ0 1690 aaKnown RBP15.12■□□□□ 0.01
CUX1-214ENST00000550008 A0A1B0GUL6 1792 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 OR51F1A6NGY5 319 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 TMCC1O94876 653 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 HOXA11P31270 313 aaPredicted RBP15.12■□□□□ 0.01
CUX1-214ENST00000550008 SH3BGRP55822 239 aaPredicted RBP15.12■□□□□ 0.01
CUX1-214ENST00000550008 MILR1Q7Z6M3 343 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 GPSM1Q86YR5 675 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 CDYL2Q8N8U2 506 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 MAB21L3Q8N8X9 362 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 CASP10Q92851 521 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 NRBF2Q96F24 287 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 TMEM209Q96SK2 561 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 ARHGAP39Q9C0H5 1083 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 AGO1Q9UL18 857 aaKnown RBP15.12■□□□□ 0.01
CUX1-214ENST00000550008 MYH4Q9Y623 1939 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 LRP5O75197 1615 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 FAM72CH0Y354 149 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 FKBP6O75344 327 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 PARNO95453 639 aaKnown RBP15.12■□□□□ 0.01
CUX1-214ENST00000550008 TCEA2Q15560 299 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 NRF1Q16656 503 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 GPR158Q5T848 1215 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 FAM72AQ5TYM5 149 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 LIPMQ5VYY2 423 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 FAM72DQ6L9T8 149 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 FAM72BQ86X60 149 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 ESAMQ96AP7 390 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 TEKT5Q96M29 485 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 ZNF558Q96NG5 402 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 GATA5Q9BWX5 397 aaPredicted RBP15.12■□□□□ 0.01
CUX1-214ENST00000550008 ZDHHC6Q9H6R6 413 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 SNX5Q9Y5X3 404 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 STRCQ7RTU9 1775 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 GSC2O15499 205 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 ZNF7P17097 686 aaPredicted RBP15.12■□□□□ 0.01
CUX1-214ENST00000550008 CCND3P30281 292 aaPredicted RBP15.12■□□□□ 0.01
CUX1-214ENST00000550008 IL2P60568 153 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 PGS1Q32NB8 556 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 FUT10Q6P4F1 479 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 ZBTB49Q6ZSB9 765 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 LRRC8DQ7L1W4 858 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 ULK2Q8IYT8 1036 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 BTN2A3PQ96KV6 586 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 CAPNS2Q96L46 248 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 C1orf50Q9BV19 199 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 NFKBIZQ9BYH8 718 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 ELOVL6Q9H5J4 265 aa15.12■□□□□ 0.01
CUX1-214ENST00000550008 C1orf232A0A0U1RR37 186 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 MYADML2A6NDP7 307 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 AOC2O75106 756 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 PSMA4P25789 261 aaKnown RBP15.11■□□□□ 0.01
CUX1-214ENST00000550008 ACLYP53396 1101 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 TAS2R39P59534 338 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 IRF9Q00978 393 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 ZNF467Q7Z7K2 595 aaPredicted RBP15.11■□□□□ 0.01
CUX1-214ENST00000550008 ZNF781Q8N8C0 355 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 OR6Y1Q8NGX8 325 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 ZNF398Q8TD17 642 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 FTHL17Q9BXU8 183 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 KLHL4Q9C0H6 718 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 DENND2DQ9H6A0 471 aaPredicted RBP15.11■□□□□ 0.01
CUX1-214ENST00000550008 VTI1BQ9UEU0 232 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 SLC25A13Q9UJS0 675 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 ADCY6O43306 1168 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 CA12O43570 354 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 C1RP00736 705 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 IVDP26440 423 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 RPS24P62847 133 aaKnown RBP15.11■□□□□ 0.01
CUX1-214ENST00000550008 STARD3Q14849 445 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 ZNF697Q5TEC3 545 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 PRDM16Q9HAZ2 1276 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 ZNHIT2Q9UHR6 403 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 NDUFAF1Q9Y375 327 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 RAP2CQ9Y3L5 183 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 PSAT1Q9Y617 370 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 TMEM88BA6NKF7 163 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 KCNU1A8MYU2 1149 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 STK25O00506 426 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 BIRC5O15392 142 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 SKIV2L2P42285 1042 aaKnown RBP15.11■□□□□ 0.01
CUX1-214ENST00000550008 WASHC5Q12768 1159 aa15.11■□□□□ 0.01
CUX1-214ENST00000550008 KCNJ11Q14654 390 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms