RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 CCDC38Q502W7 563 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 SLC44A4Q53GD3 710 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 FNBP1LQ5T0N5 605 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 SYCP2LQ5T4T6 812 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 NAIF1Q69YI7 327 aaPredicted RBP17.57■□□□□ 0.4
LETMD1-220ENST00000549686 SERPINA13PQ6UXR4 307 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 TRMT11Q7Z4G4 463 aaKnown RBP17.57■□□□□ 0.4
LETMD1-220ENST00000549686 OR52K1Q8NGK4 314 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 SRPK1Q96SB4 655 aaKnown RBP17.57■□□□□ 0.4
LETMD1-220ENST00000549686 HEPHQ9BQS7 1158 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 OSBPL1AQ9BXW6 950 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 TXLNGYQ9BZA5 131 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 TMEM245Q9H330 911 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 SAYSD1Q9NPB0 183 aa17.57■□□□□ 0.4
LETMD1-220ENST00000549686 EVLQ9UI08 416 aaPredicted RBP17.57■□□□□ 0.4
LETMD1-220ENST00000549686 KIAA1549LQ6ZVL6 1849 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 TTC34A8MYJ7 566 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 NARSO43776 548 aaKnown RBP17.56■□□□□ 0.4
LETMD1-220ENST00000549686 CPP00450 1065 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 AGTP01019 485 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 ALADP13716 330 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 MAGEA4P43358 317 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 PRKCQQ04759 706 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 ENPP2Q13822 863 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 SLC1A5Q15758 541 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 BBS9Q3SYG4 887 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 HSF5Q4G112 596 aaPredicted RBP17.56■□□□□ 0.4
LETMD1-220ENST00000549686 ARMC12Q5T9G4 340 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 DPY19L3Q6ZPD9 716 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 Q6ZVU0 165 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 RNF135Q8IUD6 432 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 OR2A12Q8NGT7 310 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 HCAR2Q8TDS4 363 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 PTCD2Q8WV60 388 aaKnown RBP17.56■□□□□ 0.4
LETMD1-220ENST00000549686 SPOCK2Q92563 424 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 TRIB3Q96RU7 358 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 XIRP2A4UGR9 3374 aa17.56■□□□□ 0.4
LETMD1-220ENST00000549686 TTC24A2A3L6 582 aaPredicted RBP17.55■□□□□ 0.4
LETMD1-220ENST00000549686 K7EQS6 105 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 HTRA2O43464 458 aaPredicted RBP17.55■□□□□ 0.4
LETMD1-220ENST00000549686 USP12O75317 370 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 SPAG6O75602 509 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 GSTA2P09210 222 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 GRIA1P42261 906 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 SESN2P58004 480 aaPredicted RBP17.55■□□□□ 0.4
LETMD1-220ENST00000549686 MRPS21P82921 87 aaKnown RBP17.55■□□□□ 0.4
LETMD1-220ENST00000549686 TRAF2Q12933 501 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 ELAVL3Q14576 367 aaKnown RBP17.55■□□□□ 0.4
LETMD1-220ENST00000549686 IHHQ14623 411 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 MLF2Q15773 248 aaPredicted RBP17.55■□□□□ 0.4
LETMD1-220ENST00000549686 DENND5AQ6IQ26 1287 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 SDE2Q6IQ49 451 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 TXNDC11Q6PKC3 985 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 DSG4Q86SJ6 1040 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 ZBED8Q8IZ13 594 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 NDUFAF2Q8N183 169 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 ZNF513Q8N8E2 541 aaPredicted RBP17.55■□□□□ 0.4
LETMD1-220ENST00000549686 PYROXD1Q8WU10 500 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 FAM3CQ92520 227 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 PWWP2AQ96N64 755 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 FBRSL1Q9HCM7 1045 aaKnown RBP17.55■□□□□ 0.4
LETMD1-220ENST00000549686 SAMD15Q9P1V8 674 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 PCDHGC4Q9Y5F7 938 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 TEX264Q9Y6I9 313 aa17.55■□□□□ 0.4
LETMD1-220ENST00000549686 SPTBN5Q9NRC6 3674 aaKnown RBP17.54■□□□□ 0.4
LETMD1-220ENST00000549686 TRAFD1O14545 582 aaPredicted RBP17.54■□□□□ 0.4
LETMD1-220ENST00000549686 FZD6O60353 706 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 GJB3O75712 270 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 PGLSO95336 258 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 PRNPP04156 253 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 ATXN1LP0C7T5 689 aaKnown RBP17.54■□□□□ 0.4
LETMD1-220ENST00000549686 NFKBIAP25963 317 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 KIR2DL1P43626 348 aaPredicted RBP17.54■□□□□ 0.4
LETMD1-220ENST00000549686 GRIA4P48058 902 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 PON2Q15165 354 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 SIRPB2Q5JXA9 342 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 EGFLAMQ63HQ2 1017 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 FSTL4Q6MZW2 842 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 UBALD2Q8IYN6 164 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 OR8D1Q8WZ84 308 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 PTPRN2Q92932 1015 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 ECHDC3Q96DC8 303 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 STAMBPL1Q96FJ0 436 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 SHDQ96IW2 340 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 SIGLEC10Q96LC7 697 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 RANBP9Q96S59 729 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 EBNA1BP2Q99848 306 aaKnown RBP17.54■□□□□ 0.4
LETMD1-220ENST00000549686 APOL2Q9BQE5 337 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 PABPC3Q9H361 631 aaKnown RBP17.54■□□□□ 0.4
LETMD1-220ENST00000549686 SUV39H2Q9H5I1 410 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 ZDHHC6Q9H6R6 413 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 FBRSQ9HAH7 460 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 WNT16Q9UBV4 365 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 IL36AQ9UHA7 158 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 MRPS17Q9Y2R5 130 aaKnown RBP17.54■□□□□ 0.4
LETMD1-220ENST00000549686 STON1Q9Y6Q2 735 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 COL4A2P08572 1712 aa17.54■□□□□ 0.4
LETMD1-220ENST00000549686 MYO18AQ92614 2054 aaKnown RBP17.53■□□□□ 0.4
LETMD1-220ENST00000549686 BNIP3LO60238 219 aa17.53■□□□□ 0.4
LETMD1-220ENST00000549686 AVILO75366 819 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms