RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 CAAP1Q9H8G2 361 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 ATP6AP2A0A1C7CYW4 349 aa14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 MYBPHLA2RUH7 354 aa14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 PDLIM1O00151 329 aa14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 MTSS1O43312 755 aa14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 PMPCBO75439 489 aa14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 ATP6AP2O75787 350 aa14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 DARSP14868 501 aaKnown RBP14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 IREB2P48200 963 aaKnown RBP14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 LRP8Q14114 963 aa14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 USP41Q3LFD5 358 aa14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 PCID2Q5JVF3 399 aa14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 HERC6Q8IVU3 1022 aa14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 NUP93Q8N1F7 819 aa14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 ZMIZ2Q8NF64 920 aa14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 TMEM79Q9BSE2 394 aa14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 DNAI2Q9GZS0 605 aa14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 NSMCE4AQ9NXX6 385 aa14.27□□□□□ -0.12
RAPGEF3-218ENST00000548919 CROCCQ5TZA2 2017 aa14.27□□□□□ -0.13
RAPGEF3-218ENST00000548919 HSPA1AP0DMV8 641 aaKnown RBP14.27□□□□□ -0.13
RAPGEF3-218ENST00000548919 HSPA1BP0DMV9 641 aaKnown RBP14.27□□□□□ -0.13
RAPGEF3-218ENST00000548919 COL6A2P12110 1019 aa14.27□□□□□ -0.13
RAPGEF3-218ENST00000548919 CKMT2P17540 419 aa14.27□□□□□ -0.13
RAPGEF3-218ENST00000548919 YWHAQP27348 245 aa14.27□□□□□ -0.13
RAPGEF3-218ENST00000548919 SEPT6Q14141 434 aa14.27□□□□□ -0.13
RAPGEF3-218ENST00000548919 ARL13BQ3SXY8 428 aa14.27□□□□□ -0.13
RAPGEF3-218ENST00000548919 DENND5AQ6IQ26 1287 aa14.27□□□□□ -0.13
RAPGEF3-218ENST00000548919 TRIML2Q8N7C3 387 aa14.27□□□□□ -0.13
RAPGEF3-218ENST00000548919 DNAJB3Q8WWF6 145 aa14.27□□□□□ -0.13
RAPGEF3-218ENST00000548919 RNF34Q969K3 372 aa14.27□□□□□ -0.13
RAPGEF3-218ENST00000548919 SPON1Q9HCB6 807 aa14.27□□□□□ -0.13
RAPGEF3-218ENST00000548919 RAD54BQ9Y620 910 aa14.27□□□□□ -0.13
RAPGEF3-218ENST00000548919 ARHGAP10A1A4S6 786 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 PSMD12O00232 456 aaPredicted RBP14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 NPHS1O60500 1241 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 TRMUO75648 421 aaKnown RBP14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 SNAI1O95863 264 aaPredicted RBP14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 C8BP07358 591 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 HCAR3P49019 387 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 CDH15P55291 814 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 RHDQ02161 417 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 ZNF792Q3KQV3 632 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 CLEC6AQ6EIG7 209 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 HMBOX1Q6NT76 420 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 SLC16A10Q8TF71 515 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 DDI1Q8WTU0 396 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 PPWD1Q96BP3 646 aaKnown RBP14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 PCED1BQ96HM7 432 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 ZNF597Q96LX8 424 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 VAT1Q99536 393 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 MRPL57Q9BQC6 102 aaKnown RBP14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 UNC93B1Q9H1C4 597 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 SUCOQ9UBS9 1254 aaKnown RBP14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 MTF2Q9Y483 593 aaPredicted RBP14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 MEIS3P2A8K0S8 358 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 CXCL11O14625 94 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 UBDO15205 165 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 TIPRLO75663 272 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 NME5P56597 212 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 UGP2Q16851 508 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 UBXN11Q5T124 520 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 PIWIL4Q7Z3Z4 852 aaKnown RBP14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 LINC00523Q86TU6 105 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 TOP6BLQ8N6T0 577 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 OR6J1Q8NGC5 347 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 OLFM1Q99784 485 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 KATNBL1Q9H079 304 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 FBRSL1Q9HCM7 1045 aaKnown RBP14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 VTA1Q9NP79 307 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 IGSF5Q9NSI5 407 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 RHBDL2Q9NX52 303 aa14.26□□□□□ -0.13
RAPGEF3-218ENST00000548919 HEATR9A2RTY3 570 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 ZNF839A8K0R7 811 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 TRIM24O15164 1050 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 KCNE1P15382 129 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 ATP5F1P24539 256 aaPredicted RBP14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 AIF1P55008 147 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 C6orf10Q5SRN2 563 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 CHSY3Q70JA7 882 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 FAM35AQ86V20 835 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 CNTN4Q8IWV2 1026 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 EMID1Q96A84 441 aaPredicted RBP14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 BRD8Q9H0E9 1235 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 UTP6Q9NYH9 597 aaKnown RBP14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 LMCD1Q9NZU5 365 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 IPPQ9Y573 584 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 LTBP3Q9NS15 1303 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 AFF1P51825 1210 aaKnown RBP14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 SLC12A2P55011 1212 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 COG7P83436 770 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 CREB5Q02930 508 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 STX5Q13190 355 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 MYBPC3Q14896 1274 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 BTBD8Q5XKL5 378 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 CUZD1Q86UP6 607 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 TAC4Q86UU9 113 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 CARM1Q86X55 608 aa14.25□□□□□ -0.13
RAPGEF3-218ENST00000548919 PPHLN1Q8NEY8 458 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms