RNA–Protein interactions for RNA: ENST00000548598.5

RACGAP1-213, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-213ENST00000548598 TRIM38O00635 465 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 PRPSAP2O60256 369 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 CKMT2P17540 419 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 ERCC2P18074 760 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 ACP1P24666 158 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 HCAR3P49019 387 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 PFN3P60673 137 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 TPM4P67936 248 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 ZNF211Q13398 564 aaPredicted RBP17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 DPYSQ14117 519 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 FZD2Q14332 565 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 GRM3Q14832 879 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 ACAP1Q15027 740 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 NPWQ8N729 165 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 HCAR2Q8TDS4 363 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 IQCDQ96DY2 449 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 CELF6Q96J87 481 aaKnown RBP17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 EXOC2Q96KP1 924 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 SLC39A8Q9C0K1 460 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 CCDC86Q9H6F5 360 aaKnown RBP17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 UCKL1Q9NWZ5 548 aa17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 BZW2Q9Y6E2 419 aaKnown RBP17.12■□□□□ 0.33
RACGAP1-213ENST00000548598 ARHGAP42A6NI28 874 aa17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 FPGTO14772 594 aa17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 INSIG1O15503 277 aa17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 SIGLEC6O43699 453 aa17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 CSF2P04141 144 aa17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 NME1P15531 152 aaKnown RBP17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 PAPOLAP51003 745 aaKnown RBP17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 SUOXP51687 545 aa17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 UBASH3AP57075 661 aa17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 DPYSL2Q16555 572 aa17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 TDRD12Q587J7 1177 aaKnown RBP17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 LRRC73Q5JTD7 316 aa17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 PARGQ86W56 976 aa17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 MARCH9Q86YJ5 346 aa17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 RFFLQ8WZ73 363 aa17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 CENPTQ96BT3 561 aa17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 CAAP1Q9H8G2 361 aa17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 MYLKQ15746 1914 aa17.11■□□□□ 0.33
RACGAP1-213ENST00000548598 FAM149AA5PLN7 773 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 NEMP1O14524 444 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 PIGNO95427 931 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 SERPING1P05155 500 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 TIMP2P16035 220 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 IL1R2P27930 398 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 IGFALSP35858 605 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 RGRP47804 291 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 CSNK1DP48730 415 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 HNRNPKP61978 463 aaKnown RBP eCLIP17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 ZBED6P86452 979 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 SGCGQ13326 291 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 CCDC157Q569K6 752 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 TPRG1LQ5T0D9 272 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 TTC7BQ86TV6 843 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 NIPA2Q8N8Q9 360 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 MDM1Q8TC05 714 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 TUBGCP5Q96RT8 1024 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 NLGN3Q9NZ94 848 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 CWC15Q9P013 229 aaKnown RBP17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 MYO1AQ9UBC5 1043 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 CAPN11Q9UMQ6 739 aa17.1■□□□□ 0.33
RACGAP1-213ENST00000548598 TOR1BO14657 336 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 TM7SF2O76062 418 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 GYPCP04921 128 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 TCF4P15884 667 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 HNF1BP35680 557 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 IL10RBQ08334 325 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 ELP6Q0PNE2 266 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 PDE1CQ14123 709 aaPredicted RBP17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 RFTN1Q14699 578 aaPredicted RBP17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 TMEM52BQ4KMG9 183 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 PPP6R3Q5H9R7 873 aaPredicted RBP17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 CACTIN-AS1Q8N1I8 211 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 LZTR1Q8N653 840 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 PDCD7Q8N8D1 485 aaKnown RBP17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 FAM181AQ8N9Y4 354 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 TP53I13Q8NBR0 393 aaPredicted RBP17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 TSEN2Q8NCE0 465 aaKnown RBP17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 ZNF548Q8NEK5 533 aaPredicted RBP17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 CXorf40AQ8TE69 158 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 ECHDC3Q96DC8 303 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 ZNF641Q96N77 438 aaPredicted RBP17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 THAP2Q9H0W7 228 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 SUV39H2Q9H5I1 410 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 ZWILCHQ9H900 591 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 DNAJC28Q9NX36 388 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 KLF15Q9UIH9 416 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 NENFQ9UMX5 172 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 LRP4O75096 1905 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 ZFYVE26Q68DK2 2539 aa17.09■□□□□ 0.33
RACGAP1-213ENST00000548598 LY6G6EA0A0G2JKS1 128 aa17.08■□□□□ 0.32
RACGAP1-213ENST00000548598 TRABD2BA6NFA1 517 aa17.08■□□□□ 0.32
RACGAP1-213ENST00000548598 SCAMP1O15126 338 aa17.08■□□□□ 0.32
RACGAP1-213ENST00000548598 DAPK3O43293 454 aa17.08■□□□□ 0.32
RACGAP1-213ENST00000548598 MMP20O60882 483 aa17.08■□□□□ 0.32
RACGAP1-213ENST00000548598 CKMT1AP12532 417 aa17.08■□□□□ 0.32
RACGAP1-213ENST00000548598 ITIH2P19823 946 aa17.08■□□□□ 0.32
RACGAP1-213ENST00000548598 PTMSP20962 102 aa17.08■□□□□ 0.32
RACGAP1-213ENST00000548598 CLDN6P56747 220 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms