RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 AP3B1O00203 1094 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 AGTP01019 485 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 EPOP01588 193 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 FAM153BP0C7A2 387 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 HLA-EP13747 358 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 CDK18Q07002 472 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 BCL2L1Q07817 233 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 ENPP2Q13822 863 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 FAM153CQ494X1 144 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 EMBQ6PCB8 327 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 RANBP10Q6VN20 620 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 KDELC2Q7Z4H8 507 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 CHPFQ8IZ52 775 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 CPEB1Q9BZB8 566 aaKnown RBP29.06■■■□□ 2.24
BRF1-213ENST00000548421 ZDHHC4Q9NPG8 344 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 CASS4Q9NQ75 786 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 ARHGEF3Q9NR81 526 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 CACNA2D2Q9NY47 1150 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 WNT16Q9UBV4 365 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 CA14Q9ULX7 337 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 ARIH1Q9Y4X5 557 aaPredicted RBP29.06■■■□□ 2.24
BRF1-213ENST00000548421 PCDHGC4Q9Y5F7 938 aa29.06■■■□□ 2.24
BRF1-213ENST00000548421 LOC285095A0A1B0GVY8 99 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 SOCS5O75159 536 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 PRKCHP24723 683 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 SERPINA4P29622 427 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 TIE1P35590 1138 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 MAGEA3P43357 314 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 CDH17Q12864 832 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 TRAF2Q12933 501 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 FNBP1LQ5T0N5 605 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 ZNF852Q6ZMS4 543 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 CENPUQ71F23 418 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 CCDC25Q86WR0 208 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 DNAAF3Q8N9W5 541 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 CHST14Q8NCH0 376 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 OR52K1Q8NGK4 314 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 ACOX2Q99424 681 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 MTG2Q9H4K7 406 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 ZDHHC6Q9H6R6 413 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 ARGLU1Q9NWB6 273 aaPredicted RBP29.05■■■□□ 2.24
BRF1-213ENST00000548421 SUN2Q9UH99 717 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 STON1Q9Y6Q2 735 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 ATG2BQ96BY7 2078 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 CKAP5Q14008 2032 aa29.05■■■□□ 2.24
BRF1-213ENST00000548421 CHRM1P11229 460 aaPredicted RBP29.04■■■□□ 2.24
BRF1-213ENST00000548421 GKP32189 559 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 FBXO43Q4G163 708 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 UBALD2Q8IYN6 164 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 TRIB3Q96RU7 358 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 HEPHQ9BQS7 1158 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 TRIOO75962 3097 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 EIF3HO15372 352 aaKnown RBP eCLIP29.04■■■□□ 2.24
BRF1-213ENST00000548421 AVILO75366 819 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 PIGNO95427 931 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 HLA-DPA1P20036 260 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 SLC1A5Q15758 541 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 DNAJC21Q5F1R6 531 aaKnown RBP29.04■■■□□ 2.24
BRF1-213ENST00000548421 C9orf64Q5T6V5 341 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 CAMK1DQ8IU85 385 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 ARNT2Q9HBZ2 717 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 IL36AQ9UHA7 158 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 FBXL21Q9UKT6 434 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 CHKBQ9Y259 395 aa29.04■■■□□ 2.24
BRF1-213ENST00000548421 E7ESA3 106 aa29.03■■■□□ 2.24
BRF1-213ENST00000548421 SIN3BO75182 1162 aa29.03■■■□□ 2.24
BRF1-213ENST00000548421 NDST3O95803 873 aa29.03■■■□□ 2.24
BRF1-213ENST00000548421 EPHX1P07099 455 aa29.03■■■□□ 2.24
BRF1-213ENST00000548421 CD72P21854 359 aa29.03■■■□□ 2.24
BRF1-213ENST00000548421 CBLBQ13191 982 aa29.03■■■□□ 2.24
BRF1-213ENST00000548421 MTM1Q13496 603 aa29.03■■■□□ 2.24
BRF1-213ENST00000548421 CCINQ13939 588 aa29.03■■■□□ 2.24
BRF1-213ENST00000548421 TRMT11Q7Z4G4 463 aaKnown RBP29.03■■■□□ 2.24
BRF1-213ENST00000548421 PDCD6IPQ8WUM4 868 aaKnown RBP29.03■■■□□ 2.24
BRF1-213ENST00000548421 VOPP1Q96AW1 172 aa29.03■■■□□ 2.24
BRF1-213ENST00000548421 LRIG1Q96JA1 1093 aa29.03■■■□□ 2.24
BRF1-213ENST00000548421 PIH1D1Q9NWS0 290 aaKnown RBP29.03■■■□□ 2.24
BRF1-213ENST00000548421 TRAFD1O14545 582 aaPredicted RBP29.02■■■□□ 2.24
BRF1-213ENST00000548421 HTRA2O43464 458 aaPredicted RBP29.02■■■□□ 2.24
BRF1-213ENST00000548421 FGF1P05230 155 aa29.02■■■□□ 2.24
BRF1-213ENST00000548421 ATXN1LP0C7T5 689 aaKnown RBP29.02■■■□□ 2.24
BRF1-213ENST00000548421 H2AFXP16104 143 aaPredicted RBP29.02■■■□□ 2.24
BRF1-213ENST00000548421 MRPS21P82921 87 aaKnown RBP29.02■■■□□ 2.24
BRF1-213ENST00000548421 PDIA2Q13087 525 aaKnown RBP29.02■■■□□ 2.24
BRF1-213ENST00000548421 ELAVL3Q14576 367 aaKnown RBP29.02■■■□□ 2.24
BRF1-213ENST00000548421 SLMAPQ14BN4 828 aa29.02■■■□□ 2.24
BRF1-213ENST00000548421 BBS9Q3SYG4 887 aa29.02■■■□□ 2.24
BRF1-213ENST00000548421 MSS51Q4VC12 460 aa29.02■■■□□ 2.24
BRF1-213ENST00000548421 C2orf27AQ580R0 203 aa29.02■■■□□ 2.24
BRF1-213ENST00000548421 ARMC12Q5T9G4 340 aa29.02■■■□□ 2.24
BRF1-213ENST00000548421 DENND5AQ6IQ26 1287 aa29.02■■■□□ 2.24
BRF1-213ENST00000548421 GJD3Q8N144 294 aa29.02■■■□□ 2.24
BRF1-213ENST00000548421 SLC25A41Q8N5S1 370 aa29.02■■■□□ 2.24
BRF1-213ENST00000548421 GRIN3AQ8TCU5 1115 aa29.02■■■□□ 2.24
BRF1-213ENST00000548421 HNRNPLLQ8WVV9 542 aaKnown RBP29.02■■■□□ 2.24
BRF1-213ENST00000548421 OR8D1Q8WZ84 308 aa29.02■■■□□ 2.24
BRF1-213ENST00000548421 CAVIN3Q969G5 261 aa29.02■■■□□ 2.24
BRF1-213ENST00000548421 ZNF641Q96N77 438 aaPredicted RBP29.02■■■□□ 2.24
BRF1-213ENST00000548421 ADGRE3Q9BY15 652 aa29.02■■■□□ 2.24
BRF1-213ENST00000548421 NDRG2Q9UN36 371 aaKnown RBP29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms