RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 PPANQ9NQ55 473 aaKnown RBP12.5□□□□□ -0.41
RAB5B-204ENST00000548068 CLDND1Q9NY35 253 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 ZFATQ9P243 1243 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 TXNDC16Q9P2K2 825 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 TBK1Q9UHD2 729 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 CLEC4EQ9ULY5 219 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 SLC8A2Q9UPR5 921 aa12.5□□□□□ -0.41
RAB5B-204ENST00000548068 KIAA1549LQ6ZVL6 1849 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 PAPSS2O95340 614 aaPredicted RBP12.49□□□□□ -0.41
RAB5B-204ENST00000548068 GSRP00390 522 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 ATXN1LP0C7T5 689 aaKnown RBP12.49□□□□□ -0.41
RAB5B-204ENST00000548068 FCARP24071 287 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 GBP2P32456 591 aaPredicted RBP12.49□□□□□ -0.41
RAB5B-204ENST00000548068 HPDP32754 393 aaPredicted RBP12.49□□□□□ -0.41
RAB5B-204ENST00000548068 NNMTP40261 264 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 RGRP47804 291 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 DGKGP49619 791 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 NUMBP49757 651 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 VASPP50552 380 aaPredicted RBP12.49□□□□□ -0.41
RAB5B-204ENST00000548068 RPL26P61254 145 aaKnown RBP12.49□□□□□ -0.41
RAB5B-204ENST00000548068 SNRPD1P62314 119 aaKnown RBP12.49□□□□□ -0.41
RAB5B-204ENST00000548068 CBX1P83916 185 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 ECT2LQ008S8 904 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 RAD51Q06609 339 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 ILF2Q12905 390 aaKnown RBP12.49□□□□□ -0.41
RAB5B-204ENST00000548068 GRM3Q14832 879 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 EFTUD2Q15029 972 aaKnown RBP eCLIP12.49□□□□□ -0.417e-6■■■■■ 30.5
RAB5B-204ENST00000548068 CTC1Q2NKJ3 1217 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 NCEH1Q6PIU2 408 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 MTSS1LQ765P7 747 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 KDELC2Q7Z4H8 507 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 MFSD6LQ8IWD5 586 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 PCDH20Q8N6Y1 951 aaKnown RBP12.49□□□□□ -0.41
RAB5B-204ENST00000548068 DCAKDQ8WVC6 231 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 RSPRY1Q96DX4 576 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 EXOC2Q96KP1 924 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 TRIB3Q96RU7 358 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 SRPK1Q96SB4 655 aaKnown RBP12.49□□□□□ -0.41
RAB5B-204ENST00000548068 TDRD1Q9BXT4 1180 aaKnown RBP12.49□□□□□ -0.41
RAB5B-204ENST00000548068 S1PR5Q9H228 398 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 ATP13A3Q9H7F0 1226 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 CLEC1BQ9P126 229 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 CTNNAL1Q9UBT7 734 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 FBXO10Q9UK96 956 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 INTS6Q9UL03 887 aaKnown RBP12.49□□□□□ -0.41
RAB5B-204ENST00000548068 RIMKLBQ9ULI2 386 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 RPL26L1Q9UNX3 145 aaKnown RBP12.49□□□□□ -0.41
RAB5B-204ENST00000548068 SLC27A6Q9Y2P4 619 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 FCF1Q9Y324 198 aaKnown RBP12.49□□□□□ -0.41
RAB5B-204ENST00000548068 RAI2Q9Y5P3 530 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 ACTL7AQ9Y615 435 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 MTCH2Q9Y6C9 303 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 MYOFQ9NZM1 2061 aa12.49□□□□□ -0.41
RAB5B-204ENST00000548068 ZCWPW2A0A1B0GU75 182 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 SOCS5O75159 536 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 TBX10O75333 385 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 CRTAMO95727 393 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 C1QAP02745 245 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 ATP5BP06576 529 aaKnown RBP12.48□□□□□ -0.41
RAB5B-204ENST00000548068 SRCP12931 536 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 CHRNA4P43681 627 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 PDE1BQ01064 536 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 BCL2L1Q07817 233 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 FCHO2Q0JRZ9 810 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 COL19A1Q14993 1142 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 PREPLQ4J6C6 727 aaPredicted RBP12.48□□□□□ -0.41
RAB5B-204ENST00000548068 MBLAC2Q68D91 279 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 GRAMD4Q6IC98 578 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 KIAA0930Q6ICG6 404 aaPredicted RBP12.48□□□□□ -0.41
RAB5B-204ENST00000548068 C22orf39Q6P5X5 142 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 TRMT10BQ6PF06 316 aaKnown RBP12.48□□□□□ -0.41
RAB5B-204ENST00000548068 EP400NLQ6ZTU2 488 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 TRABD2AQ86V40 505 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 KCNMB4Q86W47 210 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 OR2AP1Q8NGE2 309 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 CALML6Q8TD86 181 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 ELSPBP1Q96BH3 223 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 RMDN1Q96DB5 314 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 MRRFQ96E11 262 aaKnown RBP12.48□□□□□ -0.41
RAB5B-204ENST00000548068 LRRC3BQ96PB8 259 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 TUBGCP5Q96RT8 1024 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 CPNE1Q99829 537 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 FAM167BQ9BTA0 163 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 CHRAC1Q9NRG0 131 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 C20orf96Q9NUD7 363 aaPredicted RBP12.48□□□□□ -0.41
RAB5B-204ENST00000548068 HACD3Q9P035 362 aa12.48□□□□□ -0.41
RAB5B-204ENST00000548068 MYO9BQ13459 2157 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 DOCK8Q8NF50 2099 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 A0A1W2PQ67 120 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 TTC24A2A3L6 582 aaPredicted RBP12.47□□□□□ -0.41
RAB5B-204ENST00000548068 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.47□□□□□ -0.41
RAB5B-204ENST00000548068 ECI2O75521 394 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 MT-CO1P00395 513 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 SRPRAP08240 638 aaKnown RBP12.47□□□□□ -0.41
RAB5B-204ENST00000548068 SNRPAP09012 282 aaKnown RBP12.47□□□□□ -0.41
RAB5B-204ENST00000548068 LAMP2P13473 410 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 PSMC3P17980 439 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 NMBRP28336 390 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 SERPINA4P29622 427 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 RECQLP46063 649 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms