RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 DESI2Q9BSY9 194 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 MAK16Q9BXY0 300 aaKnown RBP18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 DTLQ9NZJ0 730 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 DMTF1Q9Y222 760 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 ANKRD6Q9Y2G4 727 aa18.94■□□□□ 0.62
PRPF40B-206ENST00000547764 A0A1W2PR77 199 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 TTC24A2A3L6 582 aaPredicted RBP18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 AREL1O15033 823 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 VILLO15195 856 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 SLC31A1O15431 190 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 SPINT1O43278 529 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 WNT1P04628 370 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 PRLRP16471 622 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 CD38P28907 300 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 HSPA9P38646 679 aaKnown RBP18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 NAP1L1P55209 391 aaKnown RBP18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 IFI16Q16666 785 aaKnown RBP18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 TMEM259Q4ZIN3 620 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 LRRC73Q5JTD7 316 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 MARC1Q5VT66 337 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 SLC9A4Q6AI14 798 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 MFSD7Q6UXD7 560 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 BBS5Q8N3I7 341 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 HCAR2Q8TDS4 363 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 LRRN4Q8WUT4 740 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 CALR3Q96L12 384 aaKnown RBP18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 NSMCE3Q96MG7 304 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 TSGA13Q96PP4 275 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 ATP13A3Q9H7F0 1226 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 GGT7Q9UJ14 662 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 ITM2BQ9Y287 266 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 SNX11Q9Y5W9 270 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 SHROOM3Q8TF72 1996 aa18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 ASCC3Q8N3C0 2202 aaKnown RBP18.93■□□□□ 0.62
PRPF40B-206ENST00000547764 TSPAN11A1L157 253 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 PRAMEF26H0Y7S4 382 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 NEMP1O14524 444 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 APOL1O14791 398 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 TSPAN6O43657 245 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 OPHN1O60890 802 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 ITIH2P19823 946 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 CR2P20023 1033 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 MX2P20592 715 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 CCNCP24863 283 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 SERPINA4P29622 427 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 MMP13P45452 471 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 MARCKSL1P49006 195 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 AP1S1P61966 158 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 RPS21P63220 83 aaKnown RBP18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 HNRNPDQ14103 355 aaKnown RBP18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 HLA-BQ31612 363 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 KIAA1161Q6NSJ0 714 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 TIGD7Q6NT04 549 aaPredicted RBP18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 IL27RAQ6UWB1 636 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 DGLUCYQ7Z3D6 616 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 RFX6Q8HWS3 928 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 KATNAL2Q8IYT4 538 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 TEX26Q8N6G2 289 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 MGME1Q9BQP7 344 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 GAREM1Q9H706 876 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 IL21RQ9HBE5 538 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 DNAAF2Q9NVR5 837 aaKnown RBP18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 HEY1Q9Y5J3 304 aa18.92■□□□□ 0.62
PRPF40B-206ENST00000547764 TRPM6Q9BX84 2022 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 A0A0U1RQJ8 604 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 MATN3O15232 486 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 ZFXP17010 805 aaPredicted RBP18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 CDKN2BP42772 138 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 CTSKP43235 329 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 C21orf59P57076 290 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 MAXP61244 160 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 BCL2L1Q07817 233 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 FGL2Q14314 439 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 STAT4Q14765 748 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 TAZQ16635 292 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 UGP2Q16851 508 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 CFAP58Q5T655 872 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 BRAT1Q6PJG6 821 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 ZSWIM9Q86XI8 627 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 MAML1Q92585 1016 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 KRT35Q92764 455 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 FATE1Q969F0 183 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 SKA1Q96BD8 255 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 HDAC11Q96DB2 347 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 ZNF830Q96NB3 372 aaPredicted RBP18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 NUDCD1Q96RS6 583 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 SLC17A9Q9BYT1 436 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 CA5BQ9Y2D0 317 aa18.91■□□□□ 0.62
PRPF40B-206ENST00000547764 IGLON5A6NGN9 336 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 UPK3BL1B0FP48 263 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 UPK3BL2E5RIL1 263 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 TRAFD1O14545 582 aaPredicted RBP18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 KCNK3O14649 394 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 ZRANB2O95218 330 aaKnown RBP eCLIP18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 CER1O95813 267 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 PAK4O96013 591 aaPredicted RBP18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 KRT10P13645 584 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 XPAP23025 273 aaPredicted RBP18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 SUOXP51687 545 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms