RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 RENBPP51606 427 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 PFN3P60673 137 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 YPEL5P62699 121 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 TARDBPQ13148 414 aaKnown RBP eCLIP9.47□□□□□ -0.89
YBX3-218ENST00000546298 FZD2Q14332 565 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 RFTN1Q14699 578 aaPredicted RBP9.47□□□□□ -0.89
YBX3-218ENST00000546298 ACAP1Q15027 740 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 IQCB1Q15051 598 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 CYTH1Q15438 398 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 TMEM52BQ4KMG9 183 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 BOLA3Q53S33 107 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 TDRD12Q587J7 1177 aaKnown RBP9.47□□□□□ -0.89
YBX3-218ENST00000546298 ZNF542PQ5EBM4 170 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 PPP6R3Q5H9R7 873 aaPredicted RBP9.47□□□□□ -0.89
YBX3-218ENST00000546298 ERAP2Q6P179 960 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 BRAT1Q6PJG6 821 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 SLC22A18ASQ8N1D0 253 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 LZTR1Q8N653 840 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 PAF1Q8N7H5 531 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 FAM181AQ8N9Y4 354 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 RFFLQ8WZ73 363 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 SYN2Q92777 582 aaPredicted RBP9.47□□□□□ -0.89
YBX3-218ENST00000546298 SNRNP25Q9BV90 132 aaKnown RBP9.47□□□□□ -0.89
YBX3-218ENST00000546298 NRSN2Q9GZP1 204 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 SUV39H2Q9H5I1 410 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 LRRC19Q9H756 370 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 ZWILCHQ9H900 591 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 SP110Q9HB58 689 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 UCKL1Q9NWZ5 548 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 SPASTQ9UBP0 616 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 LHX3Q9UBR4 397 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 CLCA2Q9UQC9 943 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 ITM2BQ9Y287 266 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 AK5Q9Y6K8 562 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 A0A1W2PQJ5 194 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 TSPAN11A1L157 253 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 GOLGA6L19H0YKK7 550 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 H3BRJ5 948 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 K7ESM1 405 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 TPP1O14773 563 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 ATMINO43313 823 aaPredicted RBP9.46□□□□□ -0.9
YBX3-218ENST00000546298 MT-CO3P00414 261 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 GP1BAP07359 652 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 SKILP12757 684 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 JUNDP17535 347 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 ERCC2P18074 760 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 PTMSP20962 102 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 ARL4AP40617 200 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 BLKP51451 505 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 FANCCQ00597 558 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 PIGHQ14442 188 aaPredicted RBP9.46□□□□□ -0.9
YBX3-218ENST00000546298 CA9Q16790 459 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 UGP2Q16851 508 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 KLHL40Q2TBA0 621 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 TMCO4Q5TGY1 634 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 ZCCHC8Q6NZY4 707 aaKnown RBP9.46□□□□□ -0.9
YBX3-218ENST00000546298 SRLQ86TD4 932 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 MARCH9Q86YJ5 346 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 ARFGAP1Q8N6T3 406 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 ATL2Q8NHH9 583 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 GLMNQ92990 594 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 CENPTQ96BT3 561 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 CELF6Q96J87 481 aaKnown RBP9.46□□□□□ -0.9
YBX3-218ENST00000546298 APOLD1Q96LR9 279 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 TBATAQ96M53 351 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 KCTD15Q96SI1 283 aaPredicted RBP9.46□□□□□ -0.9
YBX3-218ENST00000546298 IL12RB2Q99665 862 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.46□□□□□ -0.9
YBX3-218ENST00000546298 CINPQ9BW66 212 aaPredicted RBP9.46□□□□□ -0.9
YBX3-218ENST00000546298 SLC13A1Q9BZW2 595 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 SLC39A8Q9C0K1 460 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 ABCG4Q9H172 646 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 ISCUQ9H1K1 167 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 ATP13A3Q9H7F0 1226 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 PDFQ9HBH1 243 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 SCUBE2Q9NQ36 999 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 MYO1AQ9UBC5 1043 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 GGT7Q9UJ14 662 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 SALL4Q9UJQ4 1053 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 RAXQ9Y2V3 346 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 CEP295Q9C0D2 2601 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 KNTC1P50748 2209 aa9.46□□□□□ -0.9
YBX3-218ENST00000546298 A0A1W2PQ67 120 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 SYCE3A1L190 88 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 CFAP69A5D8W1 941 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 J3KR12 359 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 DFFAO00273 331 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 INSIG1O15503 277 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 SPINT1O43278 529 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 AQP9O43315 295 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 LZTS3O60299 673 aaPredicted RBP9.45□□□□□ -0.9
YBX3-218ENST00000546298 OPA1O60313 960 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 LRCH4O75427 683 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 SERPING1P05155 500 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 TPM3P06753 285 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 ANXA6P08133 673 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 GIMD1P0DJR0 217 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 NFKBIAP25963 317 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 HTR1BP28222 390 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 SERPINA4P29622 427 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms