RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 DMDP11532 3685 aa17■□□□□ 0.31
LTBR-215ENST00000546296 ATXN2Q99700 1313 aaKnown RBP17■□□□□ 0.31
LTBR-215ENST00000546296 GNSP15586 552 aa17■□□□□ 0.31
LTBR-215ENST00000546296 CES1P23141 567 aa17■□□□□ 0.31
LTBR-215ENST00000546296 CCR5P51681 352 aa17■□□□□ 0.31
LTBR-215ENST00000546296 TAS2R38P59533 333 aa17■□□□□ 0.31
LTBR-215ENST00000546296 IFI35P80217 286 aaPredicted RBP17■□□□□ 0.31
LTBR-215ENST00000546296 RALGPS1Q5JS13 557 aa17■□□□□ 0.31
LTBR-215ENST00000546296 SEL1L2Q5TEA6 688 aa17■□□□□ 0.31
LTBR-215ENST00000546296 REXO1L1PQ8IX06 675 aa17■□□□□ 0.31
LTBR-215ENST00000546296 HCAR2Q8TDS4 363 aa17■□□□□ 0.31
LTBR-215ENST00000546296 RAB7BQ96AH8 199 aa17■□□□□ 0.31
LTBR-215ENST00000546296 FAM131CQ96AQ9 280 aa17■□□□□ 0.31
LTBR-215ENST00000546296 BIRC7Q96CA5 298 aa17■□□□□ 0.31
LTBR-215ENST00000546296 SEMA3CQ99985 751 aa17■□□□□ 0.31
LTBR-215ENST00000546296 HERPUD2Q9BSE4 406 aa17■□□□□ 0.31
LTBR-215ENST00000546296 VPS45Q9NRW7 570 aa17■□□□□ 0.31
LTBR-215ENST00000546296 DKK3Q9UBP4 350 aa17■□□□□ 0.31
LTBR-215ENST00000546296 EIF2B4Q9UI10 523 aaKnown RBP17■□□□□ 0.31
LTBR-215ENST00000546296 PILRBQ9UKJ0 227 aa17■□□□□ 0.31
LTBR-215ENST00000546296 ZBTB32Q9Y2Y4 487 aaPredicted RBP17■□□□□ 0.31
LTBR-215ENST00000546296 FRYLO94915 3013 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 MYO15AQ9UKN7 3530 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 HACD1B0YJ81 288 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 KCNK3O14649 394 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 MTSS1O43312 755 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 RNGTTO60942 597 aaKnown RBP16.99■□□□□ 0.31
LTBR-215ENST00000546296 LRP3O75074 770 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 HLA-DQB2P05538 268 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 TIMP2P16035 220 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 POLR2LP62875 67 aaKnown RBP16.99■□□□□ 0.31
LTBR-215ENST00000546296 OTUD4Q01804 1114 aaKnown RBP16.99■□□□□ 0.31
LTBR-215ENST00000546296 PRKD1Q15139 912 aaPredicted RBP16.99■□□□□ 0.31
LTBR-215ENST00000546296 NEK5Q6P3R8 708 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 BRAT1Q6PJG6 821 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 PRPF39Q86UA1 669 aaKnown RBP16.99■□□□□ 0.31
LTBR-215ENST00000546296 ACTL9Q8TC94 416 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 PDCD6IPQ8WUM4 868 aaKnown RBP16.99■□□□□ 0.31
LTBR-215ENST00000546296 DNASE2BQ8WZ79 361 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 VOPP1Q96AW1 172 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 FEM1CQ96JP0 617 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 AGAP3Q96P47 875 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 IL12RB2Q99665 862 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 FERMT1Q9BQL6 677 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 CEP41Q9BYV8 373 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 SMOC1Q9H4F8 434 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 SEMA4GQ9NTN9 838 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 TMEM74BQ9NUR3 256 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 SUSD2Q9UGT4 822 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 TPX2Q9ULW0 747 aaKnown RBP16.99■□□□□ 0.31
LTBR-215ENST00000546296 PCDHGC4Q9Y5F7 938 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 FADS3Q9Y5Q0 445 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 ABCA7Q8IZY2 2146 aa16.99■□□□□ 0.31
LTBR-215ENST00000546296 GPR179Q6PRD1 2367 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 A0A1W2PQU0 124 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 KHNYNO15037 678 aaKnown RBP16.98■□□□□ 0.31
LTBR-215ENST00000546296 KIF5CO60282 957 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 CFIP05156 583 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 IGHV4-34P06331 123 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 CR2P20023 1033 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 MSNP26038 577 aaKnown RBP16.98■□□□□ 0.31
LTBR-215ENST00000546296 CD27P26842 260 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 MAT2AP31153 395 aaKnown RBP16.98■□□□□ 0.31
LTBR-215ENST00000546296 HOXD12P35452 270 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 SUOXP51687 545 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 EIF3EP60228 445 aaKnown RBP16.98■□□□□ 0.31
LTBR-215ENST00000546296 PPP2CBP62714 309 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 PPP2CAP67775 309 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 DSC2Q02487 901 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 ZBTB17Q13105 803 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 XRCC4Q13426 336 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 NOMO1Q15155 1222 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 LRRC73Q5JTD7 316 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 ZNF569Q5MCW4 686 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 ERAP2Q6P179 960 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 RABEPKQ7Z6M1 372 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 GPR161Q8N6U8 529 aaKnown RBP16.98■□□□□ 0.31
LTBR-215ENST00000546296 TTC13Q8NBP0 860 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 CEP76Q8TAP6 659 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 QKIQ96PU8 341 aaKnown RBP eCLIP16.98■□□□□ 0.31
LTBR-215ENST00000546296 ATP8A1Q9Y2Q0 1164 aa16.98■□□□□ 0.31
LTBR-215ENST00000546296 TSPAN6O43657 245 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 AP1G1O43747 822 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 SOCS5O75159 536 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 ZNF806P0C7X5 589 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 ABL2P42684 1182 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 CSRP2Q16527 193 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 UGP2Q16851 508 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 DUOXA1Q1HG43 343 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 TEX44Q53QW1 395 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 SLC45A4Q5BKX6 768 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 PLA2G2CQ5R387 149 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 DARS2Q6PI48 645 aaKnown RBP16.97■□□□□ 0.31
LTBR-215ENST00000546296 TRIM69Q86WT6 500 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 HORMAD1Q86X24 394 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 CDKL3Q8IVW4 592 aaPredicted RBP16.97■□□□□ 0.31
LTBR-215ENST00000546296 ZCCHC9Q8N567 271 aaKnown RBP16.97■□□□□ 0.31
LTBR-215ENST00000546296 C12orf50Q8NA57 414 aaPredicted RBP16.97■□□□□ 0.31
LTBR-215ENST00000546296 HTR3CQ8WXA8 447 aa16.97■□□□□ 0.31
LTBR-215ENST00000546296 KLK6Q92876 244 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms