RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 MAGEH1Q9H213 219 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 LHX3Q9UBR4 397 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 APOBEC3BQ9UH17 382 aaKnown RBP12.73□□□□□ -0.37
COPS7A-221ENST00000546229 DNAI1Q9UI46 699 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 RABGEF1Q9UJ41 708 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 MFHAS1Q9Y4C4 1052 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 AHCTF1Q8WYP5 2266 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 KDELR3O43731 214 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 ETFBP38117 255 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 DNA2P51530 1060 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 UCNP55089 124 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 YPEL5P62699 121 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 RHDQ02161 417 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 IRF4Q15306 451 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 NR0B2Q15466 257 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 CDO1Q16878 200 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 MYLK3Q32MK0 819 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 HS1BP3Q53T59 392 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 CDKAL1Q5VV42 579 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 CRTC1Q6UUV9 634 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 RBM44Q6ZP01 1051 aaKnown RBP12.72□□□□□ -0.37
COPS7A-221ENST00000546229 ZSWIM9Q86XI8 627 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 FAM114A1Q8IWE2 563 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 PYROXD2Q8N2H3 581 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 KYQ8NBH2 561 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 NETO2Q8NC67 525 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 FUBP1Q96AE4 644 aaKnown RBP12.72□□□□□ -0.37
COPS7A-221ENST00000546229 GRAMD1AQ96CP6 724 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 TBC1D31Q96DN5 1066 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.72□□□□□ -0.37
COPS7A-221ENST00000546229 PDFQ9HBH1 243 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 THSD1Q9NS62 852 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 NCKIPSDQ9NZQ3 722 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 DKK3Q9UBP4 350 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 SIK3Q9Y2K2 1263 aa12.72□□□□□ -0.37
COPS7A-221ENST00000546229 TLN1Q9Y490 2541 aaKnown RBP12.72□□□□□ -0.37
COPS7A-221ENST00000546229 WASH4PA8MWX3 477 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 K7ENP7 123 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 KRIT1O00522 736 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 YY2O15391 372 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 INSIG1O15503 277 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 EFSO43281 561 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 MMP20O60882 483 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 RAMP2O60895 175 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 POP4O95707 220 aaKnown RBP12.71□□□□□ -0.37
COPS7A-221ENST00000546229 PLEKP08567 350 aaPredicted RBP12.71□□□□□ -0.37
COPS7A-221ENST00000546229 TIMP2P16035 220 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 TSHRP16473 764 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 RFC1P35251 1148 aaPredicted RBP12.71□□□□□ -0.37
COPS7A-221ENST00000546229 GEMIN4P57678 1058 aaKnown RBP12.71□□□□□ -0.37
COPS7A-221ENST00000546229 SNRPD1P62314 119 aaKnown RBP12.71□□□□□ -0.37
COPS7A-221ENST00000546229 CLN3Q13286 438 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 C1orf61Q13536 156 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 AGERQ15109 404 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 ALG11Q2TAA5 492 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 TMEM52BQ4KMG9 183 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 PRRT3Q5FWE3 981 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 TCP11X2Q5H9J9 407 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 PPP1R15BQ5SWA1 713 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 ARHGAP40Q5TG30 622 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 INO80CQ6PI98 192 aaPredicted RBP12.71□□□□□ -0.37
COPS7A-221ENST00000546229 GDPD4Q6W3E5 623 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 MON1BQ7L1V2 547 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 B3GNT8Q7Z7M8 397 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 VPS36Q86VN1 386 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 RTL3Q8N8U3 475 aaKnown RBP12.71□□□□□ -0.37
COPS7A-221ENST00000546229 SLC30A5Q8TAD4 765 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 FAM172AQ8WUF8 416 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 EPAS1Q99814 870 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 CCDC3Q9BQI4 270 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 C11orf70Q9BRQ4 267 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 TTYH3Q9C0H2 523 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 SPASTQ9UBP0 616 aa12.71□□□□□ -0.37
COPS7A-221ENST00000546229 CPED1A4D0V7 1026 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 TOR1BO14657 336 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 MUSKO15146 869 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 KLK10O43240 276 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 GFPT2O94808 682 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 GM2AP17900 193 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 EEF1GP26641 437 aaKnown RBP12.7□□□□□ -0.38
COPS7A-221ENST00000546229 SDC4P31431 198 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 MMP12P39900 470 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 MLLT3P42568 568 aaPredicted RBP12.7□□□□□ -0.38
COPS7A-221ENST00000546229 ADKP55263 362 aaKnown RBP12.7□□□□□ -0.38
COPS7A-221ENST00000546229 VAC14Q08AM6 782 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 SGCGQ13326 291 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 POLD3Q15054 466 aaPredicted RBP12.7□□□□□ -0.38
COPS7A-221ENST00000546229 KLHL40Q2TBA0 621 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 WSCD2Q2TBF2 565 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 INO80DQ53TQ3 878 aaPredicted RBP12.7□□□□□ -0.38
COPS7A-221ENST00000546229 RWDD4Q6NW29 188 aaKnown RBP12.7□□□□□ -0.38
COPS7A-221ENST00000546229 PHLDB2Q86SQ0 1253 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 MSANTD4Q8NCY6 345 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 TPCN2Q8NHX9 752 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 BTN2A2Q8WVV5 523 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 NAT6Q93015 286 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 ARHGEF26Q96DR7 871 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 HMCESQ96FZ2 354 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 LIN37Q96GY3 246 aaPredicted RBP12.7□□□□□ -0.38
COPS7A-221ENST00000546229 GDAP1L1Q96MZ0 367 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms