RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 KRT33AO76009 404 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 VIPP01282 170 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 CLCNKBP51801 687 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 CNPY1Q3B7I2 92 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 C2orf27AQ580R0 203 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 C9orf57Q5W0N0 161 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 LRIG3Q6UXM1 1119 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 VN1R5Q7Z5H4 357 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 TAF8Q7Z7C8 310 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 CREG2Q8IUH2 290 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 AGGF1Q8N302 714 aaeCLIP8.68□□□□□ -1.02
CLIP1-218ENST00000545889 FAM162AQ96A26 154 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 CCDC126Q96EE4 140 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 ZNF333Q96JL9 665 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 PRKD2Q9BZL6 878 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 OCEL1Q9H607 264 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 ASB8Q9H765 288 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 DCLRE1BQ9H816 532 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 ERVW-1Q9UQF0 538 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 RUVBL2Q9Y230 463 aaKnown RBP8.68□□□□□ -1.02
CLIP1-218ENST00000545889 RAD51BO15315 384 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 ANXA5P08758 320 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 RBP1P09455 135 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 FOSL2P15408 326 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 C1QBPQ07021 282 aaKnown RBP8.68□□□□□ -1.02
CLIP1-218ENST00000545889 ITGA9Q13797 1035 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 TIGD5Q53EQ6 642 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 AGBL2Q5U5Z8 902 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 ZCCHC8Q6NZY4 707 aaKnown RBP8.68□□□□□ -1.02
CLIP1-218ENST00000545889 PRRG4Q9BZD6 226 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 PARVBQ9HBI1 364 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 CYP4F12Q9HCS2 524 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 TUBA8Q9NY65 449 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-218ENST00000545889 ENTPD4Q9Y227 616 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 IGKV6-21A0A0C4DH24 114 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 ARL5CA6NH57 179 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 RHPN2P1A8MT19 583 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 TRIM49D1C9J1S8 452 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 BOLA2-SMG1P6H3BVE0 249 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 OR6A2O95222 327 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 VNN1O95497 513 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 KRT75O95678 551 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 EDN1P05305 212 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 GSNP06396 782 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 TPH1P17752 444 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 NEK2P51955 445 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 CCNG1P51959 295 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 INPP5AQ14642 412 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 ACAP2Q15057 778 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 GALNTL6Q49A17 601 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 MPPE1Q53F39 396 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 TMEM53Q6P2H8 277 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 ACTL9Q8TC94 416 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 FRMD8P1Q9BZ68 369 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-218ENST00000545889 SYBUQ9NX95 663 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 ALKBH4Q9NXW9 302 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 NKX1-2Q9UD57 310 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-218ENST00000545889 KLF15Q9UIH9 416 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 TRHDEQ9UKU6 1024 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 SMG5Q9UPR3 1016 aaKnown RBP8.68□□□□□ -1.02
CLIP1-218ENST00000545889 COMMD3-BMI1R4GMX3 469 aa8.68□□□□□ -1.02
CLIP1-218ENST00000545889 URADA6NGE7 173 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 MEIS3P2A8K0S8 358 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 GOLGA8TH3BQL2 631 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 CPSF4O95639 269 aaKnown RBP8.67□□□□□ -1.02
CLIP1-218ENST00000545889 GSTM1P09488 218 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 CCDC166P0CW27 439 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 GLRBP48167 497 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 CLK3P49761 638 aaKnown RBP8.67□□□□□ -1.02
CLIP1-218ENST00000545889 SEC13P55735 322 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 WNT7BP56706 349 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 FMO1Q01740 532 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 GNA13Q14344 377 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 DAB2IPQ5VWQ8 1189 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 SLC13A5Q86YT5 568 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-218ENST00000545889 MCOLN2Q8IZK6 566 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 ALLCQ8N6M5 410 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 LPIN3Q9BQK8 851 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 ZYG11BQ9C0D3 744 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 PPCSQ9HAB8 311 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 PHF24Q9UPV7 400 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 ARIH1Q9Y4X5 557 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-218ENST00000545889 SNX8Q9Y5X2 465 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 ZBTB42B2RXF5 422 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 SLC31A1O15431 190 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 FGF10O15520 208 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-218ENST00000545889 ATG13O75143 517 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 PROSCO94903 275 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 SLC25A14O95258 325 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-218ENST00000545889 OR4Q2P0C623 313 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 CSHL1Q14406 222 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 PHYKPLQ8IUZ5 450 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 CDK20Q8IZL9 346 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 SETD7Q8WTS6 366 aaKnown RBP8.67□□□□□ -1.02
CLIP1-218ENST00000545889 HAPLN2Q9GZV7 340 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 RERGLQ9H628 205 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 IL1RL2Q9HB29 575 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 SIX2Q9NPC8 291 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 MRPS33Q9Y291 106 aaKnown RBP8.67□□□□□ -1.02
CLIP1-218ENST00000545889 OR10H1Q9Y4A9 318 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms