RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 SPASTQ9UBP0 616 aa14.31□□□□□ -0.12
DDX11-228ENST00000545115 SIK3Q9Y2K2 1263 aa14.31□□□□□ -0.12
DDX11-228ENST00000545115 CPED1A4D0V7 1026 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 TOR1BO14657 336 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 PRB1P04280 392 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 YBEYP58557 167 aaPredicted RBP14.3□□□□□ -0.12
DDX11-228ENST00000545115 RHOAP61586 193 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 YPEL5P62699 121 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 CXADRP78310 365 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 C19orf57Q0VDD7 668 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 SYCP1Q15431 976 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 NR0B2Q15466 257 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 CLEC16AQ2KHT3 1053 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 ISXQ2M1V0 245 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 PRRT3Q5FWE3 981 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 LRRC73Q5JTD7 316 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 EFL1Q7Z2Z2 1120 aaKnown RBP14.3□□□□□ -0.12
DDX11-228ENST00000545115 PHF13Q86YI8 300 aaPredicted RBP14.3□□□□□ -0.12
DDX11-228ENST00000545115 PYROXD2Q8N2H3 581 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 GLMNQ92990 594 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 GRAMD1AQ96CP6 724 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 NAF1Q96HR8 494 aaKnown RBP14.3□□□□□ -0.12
DDX11-228ENST00000545115 TBATAQ96M53 351 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 EPAS1Q99814 870 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 BOCQ9BWV1 1114 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 NOL6Q9H6R4 1146 aaKnown RBP14.3□□□□□ -0.12
DDX11-228ENST00000545115 THSD1Q9NS62 852 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 DKK3Q9UBP4 350 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 MFHAS1Q9Y4C4 1052 aa14.3□□□□□ -0.12
DDX11-228ENST00000545115 ANKRD62A6NC57 917 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 SIGLEC16A6NMB1 481 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 RASA4BC9J798 803 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 CCP110O43303 1012 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 RASA4O43374 803 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 CREB3O43889 395 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 MMP20O60882 483 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 GCATO75600 419 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 TCEA3O75764 348 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 RPIAP49247 311 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 ZNF143P52747 638 aaPredicted RBP14.29□□□□□ -0.12
DDX11-228ENST00000545115 AIF1P55008 147 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 UCNP55089 124 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 PARP15Q460N3 678 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 C3orf38Q5JPI3 329 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 C6orf132Q5T0Z8 1188 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 BROXQ5VW32 411 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 DNAJC24Q6P3W2 148 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 SCYL2Q6P3W7 929 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 IGF2-ASQ6U949 168 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 MACC1Q6ZN28 852 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 MON1BQ7L1V2 547 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 NEK11Q8NG66 645 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 NAT6Q93015 286 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 HMCESQ96FZ2 354 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 PCMTD1Q96MG8 357 aaPredicted RBP14.29□□□□□ -0.12
DDX11-228ENST00000545115 LRRC61Q9BV99 259 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 SLC13A1Q9BZW2 595 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 TCEAL2Q9H3H9 227 aaPredicted RBP14.29□□□□□ -0.12
DDX11-228ENST00000545115 CATSPERBQ9H7T0 1116 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 ASCL3Q9NQ33 180 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 SEPT11Q9NVA2 429 aaKnown RBP14.29□□□□□ -0.12
DDX11-228ENST00000545115 FANCLQ9NW38 375 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 SHROOM3Q8TF72 1996 aa14.29□□□□□ -0.12
DDX11-228ENST00000545115 TCRBV5S1A1TA0A578 114 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 WASH4PA8MWX3 477 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 LMO7DNF2Z398 122 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 MUSKO15146 869 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 C1QL1O75973 258 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 ANXA6P08133 673 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 XPAP23025 273 aaPredicted RBP14.28□□□□□ -0.12
DDX11-228ENST00000545115 EIF4A3P38919 411 aaKnown RBP14.28□□□□□ -0.12
DDX11-228ENST00000545115 SUOXP51687 545 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 COPB1P53618 953 aaKnown RBP14.28□□□□□ -0.12
DDX11-228ENST00000545115 ADKP55263 362 aaKnown RBP14.28□□□□□ -0.12
DDX11-228ENST00000545115 TMPRSS3P57727 454 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 PPARDQ03181 441 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 C1QBPQ07021 282 aaKnown RBP14.28□□□□□ -0.12
DDX11-228ENST00000545115 ELP6Q0PNE2 266 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 SERINC3Q13530 473 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 C1orf61Q13536 156 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 GRM3Q14832 879 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 KLHL40Q2TBA0 621 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 FAXCQ5TGI0 409 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 RBM44Q6ZP01 1051 aaKnown RBP14.28□□□□□ -0.12
DDX11-228ENST00000545115 UMODL1-AS1Q8N2C9 162 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 TP53I13Q8NBR0 393 aaPredicted RBP14.28□□□□□ -0.12
DDX11-228ENST00000545115 NETO2Q8NC67 525 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 ANKRD20A12PQ8NF67 263 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 WDR48Q8TAF3 677 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 KCNE4Q8WWG9 221 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 MCEEQ96PE7 176 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 NCAPGQ9BPX3 1015 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 WRAP53Q9BUR4 548 aaKnown RBP14.28□□□□□ -0.12
DDX11-228ENST00000545115 CPEB1Q9BZB8 566 aaKnown RBP14.28□□□□□ -0.12
DDX11-228ENST00000545115 KLC2Q9H0B6 622 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 MBNL1Q9NR56 388 aaKnown RBP14.28□□□□□ -0.12
DDX11-228ENST00000545115 PNMA8BQ9ULN7 279 aaPredicted RBP14.28□□□□□ -0.12
DDX11-228ENST00000545115 FZD10Q9ULW2 581 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 SATB2Q9UPW6 733 aa14.28□□□□□ -0.12
DDX11-228ENST00000545115 ENTPD2Q9Y5L3 495 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms