RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 CERKLQ49MI3 558 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 TMEM268Q5VZI3 342 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 TBC1D9BQ66K14 1250 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 WDR5BQ86VZ2 330 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 CCDC25Q86WR0 208 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 LSMEM1Q8N8F7 131 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 FAM47BQ8NA70 645 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 C11orf65Q8NCR3 313 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 RASSF8Q8NHQ8 419 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 OSR1Q8TAX0 266 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 FAR1Q8WVX9 515 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 NSUN4Q96CB9 384 aaKnown RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 NUF2Q9BZD4 464 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 MOV10Q9HCE1 1003 aaKnown RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 ARPP21Q9UBL0 812 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 ZNF70Q9UC06 446 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 PCDHGB5Q9Y5G0 923 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 CLDN16Q9Y5I7 305 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 ABCC5O15440 1437 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 UGGT1Q9NYU2 1555 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 ARHGEF17Q96PE2 2063 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 A0A087X1B8 175 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 DDTLA6NHG4 134 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 SLC25A17O43808 307 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 HNRNPCL1O60812 293 aaKnown RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 C1QL1O75973 258 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 EIF2S1P05198 315 aaKnown RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 CSH1P0DML2 217 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 CSH2P0DML3 217 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 BLKP51451 505 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 SOX10P56693 466 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 ACVR2BQ13705 512 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 FRG1Q14331 258 aaKnown RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 TAF11Q15544 211 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 NCEH1Q6PIU2 408 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 CYB5R4Q7L1T6 521 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 ADGRF4Q8IZF3 695 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 CMASQ8NFW8 434 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 ZNF398Q8TD17 642 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 MAP4K1Q92918 833 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 PABPC5Q96DU9 382 aaKnown RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 FAM120BQ96EK7 910 aaKnown RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 FRG2BQ96QU4 278 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 MXD3Q9BW11 206 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 SCNM1Q9BWG6 230 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 SYNCQ9H7C4 482 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 PLEKHB1Q9UF11 243 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 IPO11Q9UI26 975 aaKnown RBP3.93□□□□□ -1.78
SCFD1-207ENST00000544052 MAFFQ9ULX9 164 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 AOX1Q06278 1338 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 TNRQ92752 1358 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 MST1RQ04912 1400 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 MED14O60244 1454 aa3.93□□□□□ -1.78
SCFD1-207ENST00000544052 SYNDIG1LA6NDD5 238 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 LRRC3CA6NJW4 275 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 NEURL1O76050 574 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 WNT1P04628 370 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 SLC2A4P14672 509 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 ARL1P40616 181 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-207ENST00000544052 GNAQP50148 359 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 SNX16P57768 344 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 ALG11Q2TAA5 492 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 DUSP28Q4G0W2 176 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 MFSD4BQ5TF39 518 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 VWA5B1Q5TIE3 1220 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 FBXO42Q6P3S6 717 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 C17orf53Q8N3J3 647 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-207ENST00000544052 SLC16A11Q8NCK7 471 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 SNRNP27Q8WVK2 155 aaKnown RBP3.92□□□□□ -1.78
SCFD1-207ENST00000544052 ATOH1Q92858 354 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-207ENST00000544052 ZNF419Q96HQ0 510 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-207ENST00000544052 PRRX2Q99811 253 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 IKZF4Q9H2S9 585 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 PLSCR4Q9NRQ2 329 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 EHD2Q9NZN4 543 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 MIA2Q96PC5 1412 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 SHANK2Q9UPX8 1470 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 DUOX2Q9NRD8 1548 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 GCC2Q8IWJ2 1684 aa3.92□□□□□ -1.78
SCFD1-207ENST00000544052 KDM5AP29375 1690 aaKnown RBP3.91□□□□□ -1.78
SCFD1-207ENST00000544052 ARHGAP23Q9P227 1491 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.91□□□□□ -1.78
SCFD1-207ENST00000544052 TMEM247A6NEH6 219 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 CBY3A6NI87 242 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 BTBD18B2RXH4 712 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 B4DLN1 442 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 P4HA2O15460 535 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 PAGE4O60829 102 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 STARD3NLO95772 234 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 FSHBP01225 129 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 CLDN2P57739 230 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 VEPH1Q14D04 833 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 GSTA3Q16772 222 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 GKAP1Q5VSY0 366 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-207ENST00000544052 ATG9BQ674R7 924 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 KLHL35Q6PF15 583 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 TMCO3Q6UWJ1 677 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 LRIG3Q6UXM1 1119 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 LDLRAD3Q86YD5 345 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 TDRPQ86YL5 185 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms