RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CHD9Q3L8U1 2897 aa20.02■□□□□ 0.8
COPS7A-218ENST00000543939 MROH6A6NGR9 719 aa20.02■□□□□ 0.79
COPS7A-218ENST00000543939 TCP11X1B4DZS4 312 aa20.02■□□□□ 0.79
COPS7A-218ENST00000543939 GOLGA8TH3BQL2 631 aa20.02■□□□□ 0.79
COPS7A-218ENST00000543939 COPEO14579 308 aa20.02■□□□□ 0.79
COPS7A-218ENST00000543939 ZNF197O14709 1029 aa20.02■□□□□ 0.79
COPS7A-218ENST00000543939 VAPBO95292 243 aa20.02■□□□□ 0.79
COPS7A-218ENST00000543939 PRAMEF12O95522 483 aa20.02■□□□□ 0.79
COPS7A-218ENST00000543939 NDST3O95803 873 aa20.02■□□□□ 0.79
COPS7A-218ENST00000543939 ALDOAP04075 364 aaKnown RBP20.02■□□□□ 0.79
COPS7A-218ENST00000543939 PAMP19021 973 aa20.02■□□□□ 0.79
COPS7A-218ENST00000543939 SPRP35270 261 aaPredicted RBP20.02■□□□□ 0.79
COPS7A-218ENST00000543939 ETV4P43268 484 aa20.02■□□□□ 0.79
COPS7A-218ENST00000543939 LIMK2P53671 638 aa20.02■□□□□ 0.79
COPS7A-218ENST00000543939 LMAN2Q12907 356 aa20.02■□□□□ 0.79
COPS7A-218ENST00000543939 ELMSAN1Q6PJG2 1045 aa20.02■□□□□ 0.79
COPS7A-218ENST00000543939 ACMSDQ8TDX5 336 aa20.02■□□□□ 0.79
COPS7A-218ENST00000543939 ATP2A3Q93084 1043 aa20.02■□□□□ 0.79
COPS7A-218ENST00000543939 C12orf65Q9H3J6 166 aaKnown RBP20.02■□□□□ 0.79
COPS7A-218ENST00000543939 KIAA1522Q9P206 1035 aaPredicted RBP20.02■□□□□ 0.79
COPS7A-218ENST00000543939 SIN3BO75182 1162 aa20.01■□□□□ 0.79
COPS7A-218ENST00000543939 CYBBP04839 570 aa20.01■□□□□ 0.79
COPS7A-218ENST00000543939 VIMP08670 466 aaKnown RBP20.01■□□□□ 0.79
COPS7A-218ENST00000543939 DHRS4L1P0CG22 281 aa20.01■□□□□ 0.79
COPS7A-218ENST00000543939 TCF3P15923 654 aa20.01■□□□□ 0.79
COPS7A-218ENST00000543939 TAC1P20366 129 aa20.01■□□□□ 0.79
COPS7A-218ENST00000543939 CCT5P48643 541 aa20.01■□□□□ 0.79
COPS7A-218ENST00000543939 NSUN2Q08J23 767 aaKnown RBP eCLIP20.01■□□□□ 0.79
COPS7A-218ENST00000543939 ZNF77Q15935 545 aa20.01■□□□□ 0.79
COPS7A-218ENST00000543939 CDHR3Q6ZTQ4 885 aa20.01■□□□□ 0.79
COPS7A-218ENST00000543939 CPLX4Q7Z7G2 160 aa20.01■□□□□ 0.79
COPS7A-218ENST00000543939 RNF135Q8IUD6 432 aa20.01■□□□□ 0.79
COPS7A-218ENST00000543939 ISL2Q96A47 359 aa20.01■□□□□ 0.79
COPS7A-218ENST00000543939 LMLNQ96KR4 655 aa20.01■□□□□ 0.79
COPS7A-218ENST00000543939 ZSWIM3Q96MP5 696 aa20.01■□□□□ 0.79
COPS7A-218ENST00000543939 SRPK1Q96SB4 655 aaKnown RBP20.01■□□□□ 0.79
COPS7A-218ENST00000543939 C2orf49Q9BVC5 232 aaPredicted RBP20.01■□□□□ 0.79
COPS7A-218ENST00000543939 ARIH1Q9Y4X5 557 aaPredicted RBP20.01■□□□□ 0.79
COPS7A-218ENST00000543939 NUP210Q8TEM1 1887 aaPredicted RBP20■□□□□ 0.79
COPS7A-218ENST00000543939 TPP1O14773 563 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 PAPLNO95428 1278 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 ALADP13716 330 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 CEBPBP17676 345 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 PLK1P53350 603 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 USP4Q13107 963 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 GALNT3Q14435 633 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 SEPT7Q16181 437 aaKnown RBP20■□□□□ 0.79
COPS7A-218ENST00000543939 PDK4Q16654 411 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 DUSP6Q16828 381 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 RGS9BPQ6ZS82 235 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 NLRP9Q7RTR0 991 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 NDUFAF2Q8N183 169 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 ACDQ96AP0 544 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 PBX4Q9BYU1 374 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 TLE6Q9H808 572 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 PCMTD2Q9NV79 361 aa20■□□□□ 0.79
COPS7A-218ENST00000543939 LDB2O43679 373 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 F7P08709 466 aaPredicted RBP19.99■□□□□ 0.79
COPS7A-218ENST00000543939 CD70P32970 193 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 CRHR1P34998 444 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 MAGEA12P43365 314 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 PDE1BQ01064 536 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 RETSATQ6NUM9 610 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 NCEH1Q6PIU2 408 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 DCLK2Q8N568 766 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 OR13J1Q8NGT2 312 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 TDRD1Q9BXT4 1180 aaKnown RBP19.99■□□□□ 0.79
COPS7A-218ENST00000543939 LMAN2LQ9H0V9 348 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 CHKBQ9Y259 395 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 PLLPQ9Y342 182 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 PDE4DIPQ5VU43 2346 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 TIMM44O43615 452 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 MT-CO1P00395 513 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 PENKP01210 267 aaPredicted RBP19.99■□□□□ 0.79
COPS7A-218ENST00000543939 PRLP01236 227 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 RHOAP61586 193 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 LAMB3Q13751 1172 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 PLEKHG6Q3KR16 790 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 RALGPS1Q5JS13 557 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 FSTL4Q6MZW2 842 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 TMEM25Q86YD3 366 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 ING5Q8WYH8 240 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 SMG7Q92540 1137 aaKnown RBP19.99■□□□□ 0.79
COPS7A-218ENST00000543939 FAM111AQ96PZ2 611 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 SLC13A1Q9BZW2 595 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 VPS11Q9H270 941 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 NKX2-4Q9H2Z4 354 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 TBC1D14Q9P2M4 693 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 GGT7Q9UJ14 662 aa19.99■□□□□ 0.79
COPS7A-218ENST00000543939 INTS6Q9UL03 887 aaKnown RBP19.99■□□□□ 0.79
COPS7A-218ENST00000543939 MTO1Q9Y2Z2 717 aaKnown RBP19.99■□□□□ 0.79
COPS7A-218ENST00000543939 FCF1Q9Y324 198 aaKnown RBP19.99■□□□□ 0.79
COPS7A-218ENST00000543939 MRPS23Q9Y3D9 190 aaKnown RBP19.99■□□□□ 0.79
COPS7A-218ENST00000543939 C2orf16Q68DN1 1984 aa19.98■□□□□ 0.79
COPS7A-218ENST00000543939 SLC12A1Q13621 1099 aa19.98■□□□□ 0.79
COPS7A-218ENST00000543939 PDE1CQ14123 709 aaPredicted RBP19.98■□□□□ 0.79
COPS7A-218ENST00000543939 ZC3HC1Q86WB0 502 aaKnown RBP19.98■□□□□ 0.79
COPS7A-218ENST00000543939 ARID3BQ8IVW6 561 aaPredicted RBP19.98■□□□□ 0.79
COPS7A-218ENST00000543939 C12orf76Q8N812 135 aaPredicted RBP19.98■□□□□ 0.79
COPS7A-218ENST00000543939 ITFG1Q8TB96 612 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms