RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 LRRC61Q9BV99 259 aa22.92■■□□□ 1.26
CDKN3-207ENST00000543789 PNMA8BQ9ULN7 279 aaPredicted RBP22.92■■□□□ 1.26
CDKN3-207ENST00000543789 PADI4Q9UM07 663 aa22.92■■□□□ 1.26
CDKN3-207ENST00000543789 TDRD6O60522 2096 aaKnown RBP22.92■■□□□ 1.26
CDKN3-207ENST00000543789 ZNF462Q96JM2 2506 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 K7ENP7 123 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 TOR1BO14657 336 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 BUB1O43683 1085 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 LRIG2O94898 1065 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 TNFSF15O95150 251 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 PLEKP08567 350 aaPredicted RBP22.91■■□□□ 1.26
CDKN3-207ENST00000543789 TSHRP16473 764 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 EIF4A3P38919 411 aaKnown RBP22.91■■□□□ 1.26
CDKN3-207ENST00000543789 MLLT3P42568 568 aaPredicted RBP22.91■■□□□ 1.26
CDKN3-207ENST00000543789 PPARDQ03181 441 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 LY6DQ14210 128 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 LRRC73Q5JTD7 316 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 INO80CQ6PI98 192 aaPredicted RBP22.91■■□□□ 1.26
CDKN3-207ENST00000543789 MACC1Q6ZN28 852 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 PHLDB2Q86SQ0 1253 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 ZNF677Q86XU0 584 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 TBC1D31Q96DN5 1066 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.91■■□□□ 1.26
CDKN3-207ENST00000543789 MAGEB5Q9BZ81 275 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 SEMA4CQ9C0C4 833 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 CLPBQ9H078 707 aa22.91■■□□□ 1.26
CDKN3-207ENST00000543789 MBNL1Q9NR56 388 aaKnown RBP22.91■■□□□ 1.26
CDKN3-207ENST00000543789 SETXQ7Z333 2677 aaKnown RBP22.9■■□□□ 1.26
CDKN3-207ENST00000543789 ZSCAN5CA6NGD5 496 aaPredicted RBP22.9■■□□□ 1.26
CDKN3-207ENST00000543789 F8VZ95 297 aa22.9■■□□□ 1.26
CDKN3-207ENST00000543789 MMP8P22894 467 aa22.9■■□□□ 1.26
CDKN3-207ENST00000543789 BLKP51451 505 aa22.9■■□□□ 1.26
CDKN3-207ENST00000543789 SPIDRQ14159 915 aa22.9■■□□□ 1.26
CDKN3-207ENST00000543789 STRADAQ7RTN6 431 aa22.9■■□□□ 1.26
CDKN3-207ENST00000543789 ZNF354CQ86Y25 554 aa22.9■■□□□ 1.26
CDKN3-207ENST00000543789 GPT2Q8TD30 523 aa22.9■■□□□ 1.26
CDKN3-207ENST00000543789 GDAP1L1Q96MZ0 367 aa22.9■■□□□ 1.26
CDKN3-207ENST00000543789 EPAS1Q99814 870 aa22.9■■□□□ 1.26
CDKN3-207ENST00000543789 TTYH3Q9C0H2 523 aa22.9■■□□□ 1.26
CDKN3-207ENST00000543789 DOLKQ9UPQ8 538 aa22.9■■□□□ 1.26
CDKN3-207ENST00000543789 CFAP46Q8IYW2 2715 aa22.89■■□□□ 1.26
CDKN3-207ENST00000543789 CCDC187A0A096LP49 1063 aa22.89■■□□□ 1.25
CDKN3-207ENST00000543789 PMS2P1A4D2B8 440 aa22.89■■□□□ 1.25
CDKN3-207ENST00000543789 C2CD4BA6NLJ0 364 aa22.89■■□□□ 1.25
CDKN3-207ENST00000543789 CASC3O15234 703 aaKnown RBP22.89■■□□□ 1.25
CDKN3-207ENST00000543789 TMCC1O94876 653 aa22.89■■□□□ 1.25
CDKN3-207ENST00000543789 C6P13671 934 aa22.89■■□□□ 1.25
CDKN3-207ENST00000543789 TIMP2P16035 220 aa22.89■■□□□ 1.25
CDKN3-207ENST00000543789 ITIH2P19823 946 aa22.89■■□□□ 1.25
CDKN3-207ENST00000543789 KLHL40Q2TBA0 621 aa22.89■■□□□ 1.25
CDKN3-207ENST00000543789 CLEC14AQ86T13 490 aa22.89■■□□□ 1.25
CDKN3-207ENST00000543789 TP53I13Q8NBR0 393 aaPredicted RBP22.89■■□□□ 1.25
CDKN3-207ENST00000543789 SCG3Q8WXD2 468 aaKnown RBP22.89■■□□□ 1.25
CDKN3-207ENST00000543789 CASKIN2Q8WXE0 1202 aa22.89■■□□□ 1.25
CDKN3-207ENST00000543789 CENPIQ92674 756 aaPredicted RBP22.89■■□□□ 1.25
CDKN3-207ENST00000543789 DKK3Q9UBP4 350 aa22.89■■□□□ 1.25
CDKN3-207ENST00000543789 GULP1Q9UBP9 304 aa22.89■■□□□ 1.25
CDKN3-207ENST00000543789 NEU3Q9UQ49 428 aa22.89■■□□□ 1.25
CDKN3-207ENST00000543789 MFHAS1Q9Y4C4 1052 aa22.89■■□□□ 1.25
CDKN3-207ENST00000543789 B8ZZF3 427 aa22.88■■□□□ 1.25
CDKN3-207ENST00000543789 NTN3O00634 580 aaPredicted RBP22.88■■□□□ 1.25
CDKN3-207ENST00000543789 CYP1A1P04798 512 aaPredicted RBP22.88■■□□□ 1.25
CDKN3-207ENST00000543789 ERCC5P28715 1186 aaPredicted RBP22.88■■□□□ 1.25
CDKN3-207ENST00000543789 PTPN9P43378 593 aa22.88■■□□□ 1.25
CDKN3-207ENST00000543789 PEX5P50542 639 aa22.88■■□□□ 1.25
CDKN3-207ENST00000543789 PDX1P52945 283 aa22.88■■□□□ 1.25
CDKN3-207ENST00000543789 CDR2Q01850 454 aa22.88■■□□□ 1.25
CDKN3-207ENST00000543789 ELOCQ15369 112 aa22.88■■□□□ 1.25
CDKN3-207ENST00000543789 LVRNQ6Q4G3 990 aa22.88■■□□□ 1.25
CDKN3-207ENST00000543789 CCDC81Q6ZN84 652 aa22.88■■□□□ 1.25
CDKN3-207ENST00000543789 FSTL5Q8N475 847 aaPredicted RBP22.88■■□□□ 1.25
CDKN3-207ENST00000543789 CCDC185Q8N715 623 aa22.88■■□□□ 1.25
CDKN3-207ENST00000543789 JOSD2Q8TAC2 188 aa22.88■■□□□ 1.25
CDKN3-207ENST00000543789 SLC20A1Q8WUM9 679 aa22.88■■□□□ 1.25
CDKN3-207ENST00000543789 WRAP53Q9BUR4 548 aaKnown RBP22.88■■□□□ 1.25
CDKN3-207ENST00000543789 SYNDIG1Q9H7V2 258 aa22.88■■□□□ 1.25
CDKN3-207ENST00000543789 NOCTQ9UK39 431 aaKnown RBP22.88■■□□□ 1.25
CDKN3-207ENST00000543789 ATMQ13315 3056 aa22.87■■□□□ 1.25
CDKN3-207ENST00000543789 TMEM110-MUSTN1A8MSY1 372 aa22.87■■□□□ 1.25
CDKN3-207ENST00000543789 GFPT2O94808 682 aa22.87■■□□□ 1.25
CDKN3-207ENST00000543789 IGSF6O95976 241 aa22.87■■□□□ 1.25
CDKN3-207ENST00000543789 ITGA2BP08514 1039 aa22.87■■□□□ 1.25
CDKN3-207ENST00000543789 CTSEP14091 401 aa22.87■■□□□ 1.25
CDKN3-207ENST00000543789 HDAC4P56524 1084 aa22.87■■□□□ 1.25
CDKN3-207ENST00000543789 CLN3Q13286 438 aa22.87■■□□□ 1.25
CDKN3-207ENST00000543789 LRRC14Q15048 493 aa22.87■■□□□ 1.25
CDKN3-207ENST00000543789 DPCR1Q3MIW9 517 aa22.87■■□□□ 1.25
CDKN3-207ENST00000543789 INO80DQ53TQ3 878 aaPredicted RBP22.87■■□□□ 1.25
CDKN3-207ENST00000543789 ARL10Q8N8L6 244 aa22.87■■□□□ 1.25
CDKN3-207ENST00000543789 SLC30A5Q8TAD4 765 aa22.87■■□□□ 1.25
CDKN3-207ENST00000543789 FAM172AQ8WUF8 416 aa22.87■■□□□ 1.25
CDKN3-207ENST00000543789 COL26A1Q96A83 441 aa22.87■■□□□ 1.25
CDKN3-207ENST00000543789 C11orf70Q9BRQ4 267 aa22.87■■□□□ 1.25
CDKN3-207ENST00000543789 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.87■■□□□ 1.25
CDKN3-207ENST00000543789 ASH1LQ9NR48 2969 aaKnown RBP22.87■■□□□ 1.25
CDKN3-207ENST00000543789 GJB6O95452 261 aa22.86■■□□□ 1.25
CDKN3-207ENST00000543789 CELA2BP08218 269 aaPredicted RBP22.86■■□□□ 1.25
CDKN3-207ENST00000543789 ALPIP09923 528 aa22.86■■□□□ 1.25
CDKN3-207ENST00000543789 CHRNB2P17787 502 aa22.86■■□□□ 1.25
CDKN3-207ENST00000543789 XPAP23025 273 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms