RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 TBC1D3EA0A087X179 549 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 TBC1D3KA0A087X1G2 549 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 A0A1B0GTW7 788 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.59■□□□□ 0.57
COPS7A-216ENST00000543170 A0A1W2PPC4 97 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 TBC1D3FA6NER0 549 aaPredicted RBP18.59■□□□□ 0.57
COPS7A-216ENST00000543170 PRR5-ARHGAP8B1AHC4 643 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 TBC1D3LB9A6J9 549 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 KHNYNO15037 678 aaKnown RBP18.59■□□□□ 0.57
COPS7A-216ENST00000543170 DDX3YO15523 660 aaKnown RBP18.59■□□□□ 0.57
COPS7A-216ENST00000543170 SOCS5O75159 536 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 PIGNO95427 931 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 FTCDO95954 541 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 SERPINF2P08697 491 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 TBC1D3HP0C7X1 549 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 CCNB1P14635 433 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 CETN2P41208 172 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 ABL2P42684 1182 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 SCNN1BP51168 640 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 PPP2CBP62714 309 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 PPP2CAP67775 309 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 IFI35P80217 286 aaPredicted RBP18.59■□□□□ 0.57
COPS7A-216ENST00000543170 LMNB2Q03252 620 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 KAZNQ674X7 775 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 TBC1D3GQ6DHY5 549 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 TBC1D3CQ6IPX1 549 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 NPNTQ6UXI9 565 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 TBC1D3Q8IZP1 549 aaPredicted RBP18.59■□□□□ 0.57
COPS7A-216ENST00000543170 C12orf50Q8NA57 414 aaPredicted RBP18.59■□□□□ 0.57
COPS7A-216ENST00000543170 CCNYQ8ND76 341 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 SNX19Q92543 992 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 ECHDC3Q96DC8 303 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 ALS2CR12Q96Q35 445 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 LGMNQ99538 433 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 POLR1EQ9GZS1 481 aaKnown RBP18.59■□□□□ 0.57
COPS7A-216ENST00000543170 EIF2B4Q9UI10 523 aaKnown RBP18.59■□□□□ 0.57
COPS7A-216ENST00000543170 FADS3Q9Y5Q0 445 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 WDR87Q6ZQQ6 2873 aa18.59■□□□□ 0.57
COPS7A-216ENST00000543170 A0A1W2PQ67 120 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 APOC4-APOC2K7ER74 178 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 APOC2P02655 101 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 CES1P23141 567 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 BCL2L1Q07817 233 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 ADCY2Q08462 1091 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 CCDC6Q16204 474 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 TRIM61Q5EBN2 209 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 KIAA1161Q6NSJ0 714 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 P3H4Q92791 437 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 IL12RB2Q99665 862 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 NUSAP1Q9BXS6 441 aaKnown RBP18.58■□□□□ 0.56
COPS7A-216ENST00000543170 OSBPL8Q9BZF1 889 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 CAPN10Q9HC96 672 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 SCUBE2Q9NQ36 999 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 LZTFL1Q9NQ48 299 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 DMTF1Q9Y222 760 aa18.58■□□□□ 0.56
COPS7A-216ENST00000543170 TRPM6Q9BX84 2022 aa18.57■□□□□ 0.56
COPS7A-216ENST00000543170 TRAFD1O14545 582 aaPredicted RBP18.57■□□□□ 0.56
COPS7A-216ENST00000543170 AREL1O15033 823 aa18.57■□□□□ 0.56
COPS7A-216ENST00000543170 BCAT2O15382 392 aaPredicted RBP18.57■□□□□ 0.56
COPS7A-216ENST00000543170 SPINT1O43278 529 aa18.57■□□□□ 0.56
COPS7A-216ENST00000543170 HTRA2O43464 458 aaPredicted RBP18.57■□□□□ 0.56
COPS7A-216ENST00000543170 TSPAN6O43657 245 aa18.57■□□□□ 0.56
COPS7A-216ENST00000543170 PTMAP06454 111 aaKnown RBP18.57■□□□□ 0.56
COPS7A-216ENST00000543170 PECAM1P16284 738 aaPredicted RBP18.57■□□□□ 0.56
COPS7A-216ENST00000543170 MAOBP27338 520 aa18.57■□□□□ 0.56
COPS7A-216ENST00000543170 PRKD1Q15139 912 aaPredicted RBP18.57■□□□□ 0.56
COPS7A-216ENST00000543170 SF3A2Q15428 464 aaKnown RBP18.57■□□□□ 0.56
COPS7A-216ENST00000543170 CFAP58Q5T655 872 aa18.57■□□□□ 0.56
COPS7A-216ENST00000543170 HORMAD1Q86X24 394 aa18.57■□□□□ 0.56
COPS7A-216ENST00000543170 CAMK1DQ8IU85 385 aa18.57■□□□□ 0.56
COPS7A-216ENST00000543170 KIAA2013Q8IYS2 634 aa18.57■□□□□ 0.56
COPS7A-216ENST00000543170 ZCCHC9Q8N567 271 aaKnown RBP18.57■□□□□ 0.56
COPS7A-216ENST00000543170 TRIM58Q8NG06 486 aa18.57■□□□□ 0.56
COPS7A-216ENST00000543170 KCNF1Q9H3M0 494 aa18.57■□□□□ 0.56
COPS7A-216ENST00000543170 SMOC1Q9H4F8 434 aa18.57■□□□□ 0.56
COPS7A-216ENST00000543170 NT5MQ9NPB1 228 aa18.57■□□□□ 0.56
COPS7A-216ENST00000543170 RBM22Q9NW64 420 aaKnown RBP eCLIP18.57■□□□□ 0.56
COPS7A-216ENST00000543170 SLC6A14Q9UN76 642 aa18.57■□□□□ 0.56
COPS7A-216ENST00000543170 PACSIN2Q9UNF0 486 aaPredicted RBP18.57■□□□□ 0.56
COPS7A-216ENST00000543170 ATP8A1Q9Y2Q0 1164 aa18.57■□□□□ 0.56
COPS7A-216ENST00000543170 LNP1A1A4G5 178 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 UPK3BL1B0FP48 263 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 HACD1B0YJ81 288 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 PATE3B3GLJ2 98 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 UPK3BL2E5RIL1 263 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 MTSS1O43312 755 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 RNGTTO60942 597 aaKnown RBP18.56■□□□□ 0.56
COPS7A-216ENST00000543170 NEBLO76041 1014 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 PYGMP11217 842 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 GRIA4P48058 902 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 MAXP61244 160 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 RPS21P63220 83 aaKnown RBP18.56■□□□□ 0.56
COPS7A-216ENST00000543170 RACK1P63244 317 aaKnown RBP18.56■□□□□ 0.56
COPS7A-216ENST00000543170 ARHGAP8P85298 464 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 ELP6Q0PNE2 266 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 AP1B1Q10567 949 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 XRCC4Q13426 336 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 NOMO1Q15155 1222 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 UGP2Q16851 508 aa18.56■□□□□ 0.56
COPS7A-216ENST00000543170 TMEM259Q4ZIN3 620 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms