RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 EGFLAMQ63HQ2 1017 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 DPY19L3Q6ZPD9 716 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 ZBED8Q8IZ13 594 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 SLC25A41Q8N5S1 370 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 PAF1Q8N7H5 531 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 OR2A12Q8NGT7 310 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 PDCD6IPQ8WUM4 868 aaKnown RBP10.78□□□□□ -0.68
DDB1-221ENST00000543162 LRRC39Q96DD0 335 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 NSMCE3Q96MG7 304 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 TUBGCP5Q96RT8 1024 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 TDRD1Q9BXT4 1180 aaKnown RBP10.78□□□□□ -0.68
DDB1-221ENST00000543162 ADGRE3Q9BY15 652 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 ZDHHC6Q9H6R6 413 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 ARNT2Q9HBZ2 717 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 PIH1D1Q9NWS0 290 aaKnown RBP10.78□□□□□ -0.68
DDB1-221ENST00000543162 BFARQ9NZS9 450 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 THAP10Q9P2Z0 257 aaPredicted RBP10.78□□□□□ -0.68
DDB1-221ENST00000543162 DUSP12Q9UNI6 340 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 CHKBQ9Y259 395 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 STARD13Q9Y3M8 1113 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 F5P12259 2224 aa10.78□□□□□ -0.68
DDB1-221ENST00000543162 EDDM13A0A1B0GTR0 161 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 WASH3PC4AMC7 463 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 K7EQS6 105 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 NPC1O15118 1278 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 SOCS5O75159 536 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 BANF1O75531 89 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 PIGNO95427 931 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 CPP00450 1065 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 EGFP01133 1207 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 FGF1P05230 155 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 HLA-EP13747 358 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 HNRNPLP14866 589 aaKnown RBP eCLIP10.77□□□□□ -0.69
DDB1-221ENST00000543162 TPH1P17752 444 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 HLA-DPA1P20036 260 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 PRKCHP24723 683 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 MGAT1P26572 445 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 GKP32189 559 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 ELK3P41970 407 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 SEC13P55735 322 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 TRAF2Q12933 501 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 CBLBQ13191 982 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 GRM3Q14832 879 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 FASTKD3Q14CZ7 662 aaKnown RBP10.77□□□□□ -0.69
DDB1-221ENST00000543162 SLC1A5Q15758 541 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 HNRNPA1L2Q32P51 320 aaKnown RBP10.77□□□□□ -0.69
DDB1-221ENST00000543162 CCDC38Q502W7 563 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 SIRPB2Q5JXA9 342 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 IER5LQ5T953 404 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 ARMC12Q5T9G4 340 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 EMC10Q5UCC4 262 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 DENND5AQ6IQ26 1287 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 FSTL4Q6MZW2 842 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 CASC4Q6P4E1 433 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 TPRG1Q6ZUI0 275 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 TRMT10CQ7L0Y3 403 aaKnown RBP10.77□□□□□ -0.69
DDB1-221ENST00000543162 CAMK1DQ8IU85 385 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 RELL1Q8IUW5 271 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 ANKMY2Q8IV38 441 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 CHPFQ8IZ52 775 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 MREGQ8N565 214 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 ZNF366Q8N895 744 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 ZNF513Q8N8E2 541 aaPredicted RBP10.77□□□□□ -0.69
DDB1-221ENST00000543162 CHST14Q8NCH0 376 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 PYROXD1Q8WU10 500 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 UBLCP1Q8WVY7 318 aaPredicted RBP10.77□□□□□ -0.69
DDB1-221ENST00000543162 FAM3CQ92520 227 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 PTPRN2Q92932 1015 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 C9orf72Q96LT7 481 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 TRIB3Q96RU7 358 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 HEPHQ9BQS7 1158 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 TXLNGYQ9BZA5 131 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 CPEB1Q9BZB8 566 aaKnown RBP10.77□□□□□ -0.69
DDB1-221ENST00000543162 TMEM245Q9H330 911 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 MTG2Q9H4K7 406 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 CACNA2D2Q9NY47 1150 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 SAMD15Q9P1V8 674 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 SUN2Q9UH99 717 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 HCN2Q9UL51 889 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 SORCS3Q9UPU3 1222 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 CHMP2BQ9UQN3 213 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 MAD1L1Q9Y6D9 718 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 STON1Q9Y6Q2 735 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 ANKRD36A6QL64 1941 aa10.77□□□□□ -0.69
DDB1-221ENST00000543162 MUC22E2RYF6 1773 aaPredicted RBP10.77□□□□□ -0.69
DDB1-221ENST00000543162 C19orf67A6NJJ6 358 aa10.76□□□□□ -0.69
DDB1-221ENST00000543162 MAN2B1O00754 1011 aa10.76□□□□□ -0.69
DDB1-221ENST00000543162 HTRA2O43464 458 aaPredicted RBP10.76□□□□□ -0.69
DDB1-221ENST00000543162 PGLSO95336 258 aa10.76□□□□□ -0.69
DDB1-221ENST00000543162 ATXN1LP0C7T5 689 aaKnown RBP10.76□□□□□ -0.69
DDB1-221ENST00000543162 TIE1P35590 1138 aa10.76□□□□□ -0.69
DDB1-221ENST00000543162 IL12RB1P42701 662 aa10.76□□□□□ -0.69
DDB1-221ENST00000543162 KIR2DL1P43626 348 aaPredicted RBP10.76□□□□□ -0.69
DDB1-221ENST00000543162 EPHB1P54762 984 aa10.76□□□□□ -0.69
DDB1-221ENST00000543162 RPL26P61254 145 aaKnown RBP10.76□□□□□ -0.69
DDB1-221ENST00000543162 CRADDP78560 199 aa10.76□□□□□ -0.69
DDB1-221ENST00000543162 GALNT3Q14435 633 aa10.76□□□□□ -0.69
DDB1-221ENST00000543162 MLF2Q15773 248 aaPredicted RBP10.76□□□□□ -0.69
DDB1-221ENST00000543162 KYNUQ16719 465 aa10.76□□□□□ -0.69
DDB1-221ENST00000543162 CERCAMQ5T4B2 595 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 249.3 ms