RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 RAP2CQ9Y3L5 183 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 ZNF608Q9ULD9 1512 aaPredicted RBP4.29□□□□□ -1.72
MDM2-229ENST00000543046 MST1RQ04912 1400 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 KIF21AQ7Z4S6 1674 aa4.29□□□□□ -1.72
MDM2-229ENST00000543046 KDRP35968 1356 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 SPAG9O60271 1321 aaKnown RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 ABCC2Q92887 1545 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 PES1O00541 588 aaKnown RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 RTN2O75298 545 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 CBX6O95503 412 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 CAVIN2O95810 425 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 CNPP09543 421 aaKnown RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 UNGP13051 313 aaPredicted RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 CPA1P15085 419 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 HNRNPH1P31943 449 aaKnown RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 ELF1P32519 619 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 GJC1P36383 396 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 SKIV2L2P42285 1042 aaKnown RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 RASSF2P50749 326 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 CLCNKBP51801 687 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 TMPRSS3P57727 454 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 SMC1AQ14683 1233 aaKnown RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 ANKRD1Q15327 319 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 PTPN14Q15678 1187 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 CDC37Q16543 378 aaPredicted RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 TPD52L1Q16890 204 aaPredicted RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 SYTL3Q4VX76 610 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 SH2D4BQ5SQS7 431 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 WASHC2DQ5SRD0 308 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 C1QTNF12Q5T7M4 302 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 WLSQ5T9L3 541 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 TMEM268Q5VZI3 342 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 ZNF549Q6P9A3 640 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 CLEC4GQ6UXB4 293 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 C9orf47Q6ZRZ4 202 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 SLC16A12Q6ZSM3 486 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 WDR5BQ86VZ2 330 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 CPXCR1Q8N123 301 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 PELI3Q8N2H9 469 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 C17orf53Q8N3J3 647 aaPredicted RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 DRAXINQ8NBI3 349 aaPredicted RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 C7orf57Q8NEG2 295 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 BICD2Q8TD16 824 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 ASB5Q8WWX0 329 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 RNFT2Q96EX2 444 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 ZSCAN31Q96LW9 406 aaPredicted RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 SCLT1Q96NL6 688 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 CAMK1GQ96NX5 476 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 TEFMQ96QE5 360 aaKnown RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 WDR77Q9BQA1 342 aaPredicted RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 RBM38Q9H0Z9 239 aaKnown RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 HOMER3Q9NSC5 361 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 PLEKHB1Q9UF11 243 aaPredicted RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 CD207Q9UJ71 328 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 SMC3Q9UQE7 1217 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 GRIN2AQ12879 1464 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 TCOF1Q13428 1488 aaKnown RBP4.28□□□□□ -1.72
MDM2-229ENST00000543046 RALGAPBQ86X10 1494 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 CASKIN1Q8WXD9 1431 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 KIF14Q15058 1648 aa4.28□□□□□ -1.72
MDM2-229ENST00000543046 RPS10-NUDT3A0A1W2PQS6 291 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 OR6C68A6NDL8 312 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 MAP2K7O14733 419 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 TNFRSF13BO14836 293 aaPredicted RBP4.27□□□□□ -1.73
MDM2-229ENST00000543046 CHUKO15111 745 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 INSIG1O15503 277 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 KINO60870 393 aaKnown RBP4.27□□□□□ -1.73
MDM2-229ENST00000543046 SNHG28P0DPA3 235 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 CHRNB2P17787 502 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 CCT5P48643 541 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 MNAT1P51948 309 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 FOXG1P55316 489 aaPredicted RBP4.27□□□□□ -1.73
MDM2-229ENST00000543046 NUCB1Q02818 461 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 FHL1Q13642 323 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 RBBP5Q15291 538 aaKnown RBP4.27□□□□□ -1.73
MDM2-229ENST00000543046 MAPRE1Q15691 268 aaKnown RBP4.27□□□□□ -1.73
MDM2-229ENST00000543046 CCDC158Q5M9N0 1113 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 ZSCAN25Q6NSZ9 544 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 TMEM71Q6P5X7 295 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 GJB7Q6PEY0 223 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 LVRNQ6Q4G3 990 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 GBP6Q6ZN66 633 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 CTU1Q7Z7A3 348 aaKnown RBP4.27□□□□□ -1.73
MDM2-229ENST00000543046 PCGF5Q86SE9 256 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 SDCCAG8Q86SQ7 713 aaPredicted RBP4.27□□□□□ -1.73
MDM2-229ENST00000543046 TMTC2Q8N394 836 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 HORMAD2Q8N7B1 307 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 USP38Q8NB14 1042 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 ENGASEQ8NFI3 743 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 CTCFLQ8NI51 663 aaPredicted RBP4.27□□□□□ -1.73
MDM2-229ENST00000543046 GABPB2Q8TAK5 448 aaPredicted RBP4.27□□□□□ -1.73
MDM2-229ENST00000543046 TWNKQ96RR1 684 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 WACQ9BTA9 647 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 BATF3Q9NR55 127 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 SPATS2LQ9NUQ6 558 aaKnown RBP4.27□□□□□ -1.73
MDM2-229ENST00000543046 CPSF2Q9P2I0 782 aaKnown RBP4.27□□□□□ -1.73
MDM2-229ENST00000543046 HDAC6Q9UBN7 1215 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.27□□□□□ -1.732e-6■■□□□ 12.9
MDM2-229ENST00000543046 GTF2A1LQ9UNN4 478 aa4.27□□□□□ -1.73
MDM2-229ENST00000543046 GDAQ9Y2T3 454 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms