RNA–Protein interactions for RNA: ENST00000542943.5

BCKDHA-206, Transcript of branched chain keto acid dehydrogenase E1, alpha polypeptide, humanhuman

TSL 5

Gene BCKDHA, Length 994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHA-206ENST00000542943 HDAC8Q9BY41 377 aa18.64■□□□□ 0.57
BCKDHA-206ENST00000542943 PABPC3Q9H361 631 aaKnown RBP18.64■□□□□ 0.57
BCKDHA-206ENST00000542943 NOD2Q9HC29 1040 aa18.64■□□□□ 0.57
BCKDHA-206ENST00000542943 FAM153AQ9UHL3 310 aa18.64■□□□□ 0.57
BCKDHA-206ENST00000542943 RPL26L1Q9UNX3 145 aaKnown RBP18.64■□□□□ 0.57
BCKDHA-206ENST00000542943 MRFAP1Q9Y605 127 aa18.64■□□□□ 0.57
BCKDHA-206ENST00000542943 ERI2A8K979 691 aaKnown RBP18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 AXIN1O15169 862 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 GALR2O43603 387 aaPredicted RBP18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 ECEL1O95672 775 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 IGLV3-19P01714 112 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 CNR2P34972 360 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 RGRP47804 291 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 PSMD8P48556 350 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 DHX34Q14147 1143 aaKnown RBP18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 USP39Q53GS9 565 aaKnown RBP18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 CCDC70Q6NSX1 233 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 KIAA1324Q6UXG2 1013 aaKnown RBP18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 B4GALNT4Q76KP1 1039 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 LONP2Q86WA8 852 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 PAF1Q8N7H5 531 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 SPATA4Q8NEY3 305 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 MDGA1Q8NFP4 955 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 ZNF419Q96HQ0 510 aaPredicted RBP18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 SPACA7Q96KW9 195 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 ADGRE3Q9BY15 652 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 KDM4CQ9H3R0 1056 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 PCDH9Q9HC56 1237 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 ITM2CQ9NQX7 267 aa18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 USP36Q9P275 1121 aaKnown RBP18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 TPX2Q9ULW0 747 aaKnown RBP18.63■□□□□ 0.57
BCKDHA-206ENST00000542943 TSPAN11A1L157 253 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 HTRA2O43464 458 aaPredicted RBP18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 EPOP01588 193 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 UGT2B4P06133 528 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 CTSLP07711 333 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 NFKB1P19838 968 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 CD68P34810 354 aaPredicted RBP18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 NEK3P51956 506 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 DSC2Q02487 901 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 CSTF1Q05048 431 aaKnown RBP18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 ARMC12Q5T9G4 340 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 ERN2Q76MJ5 926 aaKnown RBP18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 MAATS1Q7Z4T9 603 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 WDR5BQ86VZ2 330 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 CEP112Q8N8E3 955 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 OR6K2Q8NGY2 324 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 CCDC110Q8TBZ0 833 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 TADA1Q96BN2 335 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 ECHDC3Q96DC8 303 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 SRPK1Q96SB4 655 aaKnown RBP18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 LRFN3Q9BTN0 628 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 CEP41Q9BYV8 373 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 IRF2BPLQ9H1B7 796 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 KCNH6Q9H252 994 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 C10orf88Q9H8K7 445 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 C2orf42Q9NWW7 574 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 SMARCAL1Q9NZC9 954 aa18.62■□□□□ 0.57
BCKDHA-206ENST00000542943 PDE2AO00408 941 aaPredicted RBP18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 NDC80O14777 642 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 MID1O15344 667 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 XPAP23025 273 aaPredicted RBP18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 CD86P42081 329 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 KCNJ1P48048 391 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 GDF10P55107 478 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 SKOR1P84550 965 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 NIPAL4Q0D2K0 466 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 FBXL19Q6PCT2 694 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 SLC36A4Q6YBV0 504 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 CAMK1DQ8IU85 385 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 GANCQ8TET4 914 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 FAM131CQ96AQ9 280 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 IFT43Q96FT9 208 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 KLHL32Q96NJ5 620 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 TDRD1Q9BXT4 1180 aaKnown RBP18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 DDX47Q9H0S4 455 aaKnown RBP18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 SGK2Q9HBY8 427 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 FBXL12Q9NXK8 326 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 SARDHQ9UL12 918 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 PHTF1Q9UMS5 762 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 RAI2Q9Y5P3 530 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 ZNF318Q5VUA4 2279 aa18.61■□□□□ 0.57
BCKDHA-206ENST00000542943 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 C16orf96A6NNT2 1141 aa18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 TRAFD1O14545 582 aaPredicted RBP18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 PGLSO95336 258 aa18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 KRT14P02533 472 aa18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 TDGF1P13385 188 aa18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 TPMTP51580 245 aa18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 ELP6Q0PNE2 266 aa18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 ANGPT1Q15389 498 aa18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 PPP1R7Q15435 360 aa18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 TTC27Q6P3X3 843 aa18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 PRPF39Q86UA1 669 aaKnown RBP18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 KLHDC8BQ8IXV7 354 aa18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 HDDC3Q8N4P3 179 aa18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 NELL1Q92832 810 aa18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 FEM1CQ96JP0 617 aa18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 RBM15Q96T37 977 aaKnown RBP eCLIP18.6■□□□□ 0.57
BCKDHA-206ENST00000542943 FSD1LQ9BXM9 530 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms