RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 INTS6LQ5JSJ4 861 aaKnown RBP8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 CROCCP3Q8IVE0 287 aa8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 PHTF2Q8N3S3 785 aa8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 FAM156AQ8NDB6 213 aa8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 SPATA22Q8NHS9 363 aa8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 UTP4Q969X6 686 aaKnown RBP8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 TCF12Q99081 682 aa8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 HNRNPABQ99729 332 aaKnown RBP8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 HGH1Q9BTY7 390 aa8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 EIF2AQ9BY44 585 aaKnown RBP8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 CACYBPQ9HB71 228 aaKnown RBP8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.27□□□□□ -1.087e-7■■■□□ 15.1
PRKAB1-207ENST00000542698 FZD10Q9ULW2 581 aa8.27□□□□□ -1.08
PRKAB1-207ENST00000542698 DOT1LQ8TEK3 1739 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 BTN3A1O00481 513 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 TIPRLO75663 272 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 LINGO3P0C6S8 592 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 SMIM10L2AP0DMW4 78 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 SMIM10L2BP0DMW5 78 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 INPP1P49441 399 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 GLUD2P49448 558 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 SCNN1GP51170 649 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 C21orf59P57076 290 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 LILRA4P59901 499 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 MAXP61244 160 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 SNX17Q15036 470 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 CDCA2Q69YH5 1023 aaPredicted RBP8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 NCBP2-AS2Q69YL0 99 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 ESRP1Q6NXG1 681 aaKnown RBP8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 OR56A4Q8NGH8 313 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 LPIN3Q9BQK8 851 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 CLPBQ9H078 707 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 OLA1Q9NTK5 396 aaKnown RBP8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 TELO2Q9Y4R8 837 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 ANKRD12Q6UB98 2062 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 PTGES3LE9PB15 166 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 MAN1A2O60476 641 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 TRMUO75648 421 aaKnown RBP8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 SLC2A4P14672 509 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 OXCT1P55809 520 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 RALGDSQ12967 914 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 MTX3Q5HYI7 312 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 TMEM198Q66K66 360 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 FAM45BPQ6NSW5 357 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 MOB2Q70IA6 237 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 TMCO5AQ8N6Q1 288 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 FAM45AQ8TCE6 357 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 FIG4Q92562 907 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 VPS33AQ96AX1 596 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 PRR11Q96HE9 360 aaPredicted RBP8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 TEKT5Q96M29 485 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 DACH2Q96NX9 599 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 OR52B2Q96RD2 323 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 ACOX2Q99424 681 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 POLR1EQ9GZS1 481 aaKnown RBP8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 UNC93B1Q9H1C4 597 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 POLR1BQ9H9Y6 1135 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 LIMD1Q9UGP4 676 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 CYTH4Q9UIA0 394 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 CRLS1Q9UJA2 301 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 NAV1Q8NEY1 1877 aa8.27□□□□□ -1.09
PRKAB1-207ENST00000542698 AZIN1O14977 448 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 USP2O75604 605 aaPredicted RBP8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 RTN3O95197 1032 aaPredicted RBP8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 ARIH2O95376 493 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 MT-CYBP00156 380 aaPredicted RBP8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 ITGAXP20702 1163 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 FMO4P31512 558 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 CCNG1P51959 295 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 TAS2R39P59534 338 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 MPP1Q00013 466 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 DLG1Q12959 904 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 PPIL2Q13356 520 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 DPYSQ14117 519 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 DMC1Q14565 340 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 TTLL9Q3SXZ7 439 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 CTXN3Q4LDR2 81 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 CENPLQ8N0S6 344 aaPredicted RBP8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 ZNF784Q8NCA9 323 aaPredicted RBP8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 ITFG1Q8TB96 612 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 EZH1Q92800 747 aaPredicted RBP8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 ADGRE3Q9BY15 652 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 HAPLN2Q9GZV7 340 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 GALNT8Q9NY28 637 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 TMCO1Q9UM00 188 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 SLC8A2Q9UPR5 921 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 COL1A2P08123 1366 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 CBX4O00257 560 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 KATNA1O75449 491 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 ENDOD1O94919 500 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 AMHP03971 560 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 TKTP29401 623 aaKnown RBP8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 S100A5P33763 92 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 TRPC1P48995 793 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 POLD2P49005 469 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 THOP1P52888 689 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 MAPK10P53779 464 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 DAB2P98082 770 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 VAC14Q08AM6 782 aa8.26□□□□□ -1.09
PRKAB1-207ENST00000542698 MBLAC2Q68D91 279 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms