RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 MARCH9Q86YJ5 346 aa16.61■□□□□ 0.25
CCND1-205ENST00000542367 DCP2Q8IU60 420 aaKnown RBP16.61■□□□□ 0.25
CCND1-205ENST00000542367 GALNT15Q8N3T1 639 aa16.61■□□□□ 0.25
CCND1-205ENST00000542367 NPWQ8N729 165 aa16.61■□□□□ 0.25
CCND1-205ENST00000542367 ASB12Q8WXK4 309 aa16.61■□□□□ 0.25
CCND1-205ENST00000542367 HSPH1Q92598 858 aa16.61■□□□□ 0.25
CCND1-205ENST00000542367 BTBD6Q96KE9 485 aa16.61■□□□□ 0.25
CCND1-205ENST00000542367 KLF6Q99612 283 aaPredicted RBP16.61■□□□□ 0.25
CCND1-205ENST00000542367 ZWILCHQ9H900 591 aa16.61■□□□□ 0.25
CCND1-205ENST00000542367 DKK3Q9UBP4 350 aa16.61■□□□□ 0.25
CCND1-205ENST00000542367 PCDHGA1Q9Y5H4 931 aa16.61■□□□□ 0.25
CCND1-205ENST00000542367 TDRD6O60522 2096 aaKnown RBP16.61■□□□□ 0.25
CCND1-205ENST00000542367 ARID1BQ8NFD5 2236 aaPredicted RBP16.61■□□□□ 0.25
CCND1-205ENST00000542367 KMT2BQ9UMN6 2715 aaPredicted RBP16.61■□□□□ 0.25
CCND1-205ENST00000542367 FPGTO14772 594 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 MMP20O60882 483 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 TPM3P06753 285 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 DGKAP23743 735 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 DPYSQ14117 519 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 SMAD1Q15797 465 aaKnown RBP16.6■□□□□ 0.25
CCND1-205ENST00000542367 DPYSL2Q16555 572 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 ZNF542PQ5EBM4 170 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 CCDC122Q5T0U0 273 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 ALKBH5Q6P6C2 394 aaKnown RBP16.6■□□□□ 0.25
CCND1-205ENST00000542367 ARHGAP36Q6ZRI8 547 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 TP53INP2Q8IXH6 220 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 TSEN2Q8NCE0 465 aaKnown RBP16.6■□□□□ 0.25
CCND1-205ENST00000542367 HCAR2Q8TDS4 363 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 CXorf40AQ8TE69 158 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 TSC1Q92574 1164 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 NUP85Q9BW27 656 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 SUV39H2Q9H5I1 410 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 SP110Q9HB58 689 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 GPR27Q9NS67 375 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 UCKL1Q9NWZ5 548 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 IP6K2Q9UHH9 426 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 IPO11Q9UI26 975 aaKnown RBP16.6■□□□□ 0.25
CCND1-205ENST00000542367 ANAPC7Q9UJX3 599 aa16.6■□□□□ 0.25
CCND1-205ENST00000542367 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCND1-205ENST00000542367 USP24Q9UPU5 2620 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 FAM149AA5PLN7 773 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 H3BRJ5 948 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 TRIM38O00635 465 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 BUB1BO60566 1050 aaPredicted RBP16.59■□□□□ 0.25
CCND1-205ENST00000542367 RFPL3O75679 317 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 TM7SF2O76062 418 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 CYP1A2P05177 515 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 RARAP10276 462 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 XPAP23025 273 aaPredicted RBP16.59■□□□□ 0.25
CCND1-205ENST00000542367 AMPD1P23109 780 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 ARL4AP40617 200 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 RABIFP47224 123 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 RGRP47804 291 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 ACADVLP49748 655 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 FZD2Q14332 565 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 GRM3Q14832 879 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 TXNRD3NBQ6F5E7 133 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 KDM7AQ6ZMT4 941 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 POLNQ7Z5Q5 900 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 SRLQ86TD4 932 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 LZTR1Q8N653 840 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 DENND6BQ8NEG7 585 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 CENPTQ96BT3 561 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 IFT43Q96FT9 208 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 WRAP53Q9BUR4 548 aaKnown RBP16.59■□□□□ 0.25
CCND1-205ENST00000542367 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.59■□□□□ 0.25
CCND1-205ENST00000542367 DNAJC28Q9NX36 388 aa16.59■□□□□ 0.25
CCND1-205ENST00000542367 SPTY2D1-AS1A0A0U1RR47 76 aa16.58■□□□□ 0.24
CCND1-205ENST00000542367 SIGLEC6O43699 453 aa16.58■□□□□ 0.24
CCND1-205ENST00000542367 PIAS2O75928 621 aa16.58■□□□□ 0.24
CCND1-205ENST00000542367 CAPNS1P04632 268 aa16.58■□□□□ 0.24
CCND1-205ENST00000542367 C1SP09871 688 aa16.58■□□□□ 0.24
CCND1-205ENST00000542367 CKMT2P17540 419 aa16.58■□□□□ 0.24
CCND1-205ENST00000542367 CSNK1DP48730 415 aa16.58■□□□□ 0.24
CCND1-205ENST00000542367 IL10RBQ08334 325 aa16.58■□□□□ 0.24
CCND1-205ENST00000542367 ZNF211Q13398 564 aaPredicted RBP16.58■□□□□ 0.24
CCND1-205ENST00000542367 PDE1CQ14123 709 aaPredicted RBP16.58■□□□□ 0.24
CCND1-205ENST00000542367 RFTN1Q14699 578 aaPredicted RBP16.58■□□□□ 0.24
CCND1-205ENST00000542367 UGP2Q16851 508 aa16.58■□□□□ 0.24
CCND1-205ENST00000542367 PROX2Q3B8N5 592 aa16.58■□□□□ 0.24
CCND1-205ENST00000542367 TMEM52BQ4KMG9 183 aa16.58■□□□□ 0.24
CCND1-205ENST00000542367 CAMK1DQ8IU85 385 aa16.58■□□□□ 0.24
CCND1-205ENST00000542367 NIPA2Q8N8Q9 360 aa16.58■□□□□ 0.24
CCND1-205ENST00000542367 TEKT4Q8WW24 435 aa16.58■□□□□ 0.24
CCND1-205ENST00000542367 ZNF641Q96N77 438 aaPredicted RBP16.58■□□□□ 0.24
CCND1-205ENST00000542367 CINPQ9BW66 212 aaPredicted RBP16.58■□□□□ 0.24
CCND1-205ENST00000542367 ETNK2Q9NVF9 386 aa16.58■□□□□ 0.24
CCND1-205ENST00000542367 GOLGA4Q13439 2230 aaKnown RBP16.57■□□□□ 0.24
CCND1-205ENST00000542367 TSPAN11A1L157 253 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 MYO1FO00160 1098 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 FFAR2O15552 330 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 GIMD1P0DJR0 217 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 CDK4P11802 303 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 HNRNPH3P31942 346 aaKnown RBP16.57■□□□□ 0.24
CCND1-205ENST00000542367 EIF4A3P38919 411 aaKnown RBP16.57■□□□□ 0.24
CCND1-205ENST00000542367 SUOXP51687 545 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 PFN3P60673 137 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 HNRNPKP61978 463 aaKnown RBP eCLIP16.57■□□□□ 0.24
CCND1-205ENST00000542367 SLC25A11Q02978 314 aaKnown RBP16.57■□□□□ 0.24
CCND1-205ENST00000542367 NSUN2Q08J23 767 aaKnown RBP eCLIP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms